RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 DUSP3P51452 185 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 METAP1P53582 386 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 NUCB2P80303 420 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 SRSF6Q13247 344 aaKnown RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 UBAP2LQ14157 1087 aaKnown RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 DRAP1Q14919 205 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 ISXQ2M1V0 245 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 SETMARQ53H47 684 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 ADGRF1Q5T601 910 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 C9orf64Q5T6V5 341 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 FAM173BQ6P4H8 233 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 EFL1Q7Z2Z2 1120 aaKnown RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 BRAPQ7Z569 592 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 PTAR1Q7Z6K3 402 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 CFAP52Q8N1V2 620 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 CCDC150Q8NCX0 1101 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 OR4C6Q8NH72 309 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 PLEKHO2Q8TD55 490 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 PRR11Q96HE9 360 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 DUSP16Q9BY84 665 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 LRRC27Q9C0I9 530 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 BLZF1Q9H2G9 400 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 ERVMER34-1Q9H9K5 563 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 EPB41L5Q9HCM4 733 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 OLA1Q9NTK5 396 aaKnown RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 TFIP11Q9UBB9 837 aaKnown RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 IPO11Q9UI26 975 aaKnown RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 SLCO3A1Q9UIG8 710 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 FBXO2Q9UK22 296 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 ERVW-1Q9UQF0 538 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 SPTA1P02549 2419 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 FRMD3A2A2Y4 597 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 NEMP2A6NFY4 417 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 PRAMEF26H0Y7S4 382 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 TERTO14746 1132 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 EIF5BO60841 1220 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 RNGTTO60942 597 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 DXOO77932 396 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 C4BPAP04003 597 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ASLP04424 464 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 CKMT1AP12532 417 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 GP1BBP13224 206 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 C5AR1P21730 350 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 MZF1P28698 734 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 AP3M2P53677 418 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 CLDN2P57739 230 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ZNF445P59923 1031 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 RPS24P62847 133 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 CYP4F2P78329 520 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ECT2LQ008S8 904 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 AMPD3Q01432 767 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ADIGQ0VDE8 80 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 CLN3Q13286 438 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ZNF177Q13360 481 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 TCEA2Q15560 299 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 TGIF1Q15583 401 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 TRIP4Q15650 581 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 GOLGA7BQ2TAP0 167 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 LINC00303Q3SY05 128 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 PITRM1Q5JRX3 1037 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 CDCP2Q5VXM1 449 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 OR6B2Q6IFH4 312 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 RBM44Q6ZP01 1051 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 KANSL1Q7Z3B3 1105 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 PIGZQ86VD9 579 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 SIX6OS1Q8N1H7 587 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 CACTIN-AS1Q8N1I8 211 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ZSCAN1Q8NBB4 408 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 HJURPQ8NCD3 748 aaPredicted RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ZNF507Q8TCN5 953 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 PARD3BQ8TEW8 1205 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 RNF34Q969K3 372 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 SGF29Q96ES7 293 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 SLC46A1Q96NT5 459 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 VRTNQ9H8Y1 702 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 PNPLA8Q9NP80 782 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 CYTH4Q9UIA0 394 aa7.12□□□□□ -1.27
HDAC1-204ENST00000471488 HBS1LQ9Y450 684 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 SRPRBQ9Y5M8 271 aaKnown RBP7.12□□□□□ -1.27
HDAC1-204ENST00000471488 ITIH6Q6UXX5 1313 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 TARSL2A2RTX5 802 aaKnown RBP7.11□□□□□ -1.27
HDAC1-204ENST00000471488 K7ESM1 405 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 TULP2O00295 520 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 SUV39H1O43463 412 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 PPFIA2O75334 1257 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 PIAS2O75928 621 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 PCDH8O95206 1070 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 AFPP02771 609 aaKnown RBP7.11□□□□□ -1.27
HDAC1-204ENST00000471488 RPN1P04843 607 aaKnown RBP7.11□□□□□ -1.27
HDAC1-204ENST00000471488 SLFN14P0C7P3 912 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 TRIM49P0CI25 452 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 TRIM49CP0CI26 452 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 CD19P15391 556 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 SLC6A4P31645 630 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 AFMP43652 599 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 GCLMP48507 274 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 RGS7P49802 495 aa7.11□□□□□ -1.27
HDAC1-204ENST00000471488 PDE4CQ08493 712 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms