RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 SLC22A23A1A5C7 686 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 EPN2O95208 641 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 STAT6P42226 847 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 HALP42357 657 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 SOX2P48431 317 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 ALDH7A1P49419 539 aaKnown RBP5□□□□□ -1.61
PRPF40A-205ENST00000467114 AGTR2P50052 363 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 TLE3Q04726 772 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 DCTN1Q14203 1278 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 DHX8Q14562 1220 aaKnown RBP5□□□□□ -1.61
PRPF40A-205ENST00000467114 INO80DQ53TQ3 878 aaPredicted RBP5□□□□□ -1.61
PRPF40A-205ENST00000467114 NFRKBQ6P4R8 1299 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 RBM44Q6ZP01 1051 aaKnown RBP5□□□□□ -1.61
PRPF40A-205ENST00000467114 SMC5Q8IY18 1101 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 B4GALNT2Q8NHY0 566 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 SLC2A12Q8TD20 617 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 AKAP1Q92667 903 aaKnown RBP eCLIP5□□□□□ -1.61
PRPF40A-205ENST00000467114 HERPUD2Q9BSE4 406 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 ISCA1Q9BUE6 129 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 TUBB6Q9BUF5 446 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 PCDHA12Q9UN75 941 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 B3GNT3Q9Y2A9 372 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 PCDHGB3Q9Y5G1 929 aa5□□□□□ -1.61
PRPF40A-205ENST00000467114 EME2A4GXA9 379 aaPredicted RBP4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 PRSS44E7EML9 344 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 PPP6R2O75170 966 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 LARGE1O95461 756 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 RFPL3SP0C7P2 107 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 RBM6P78332 1123 aaKnown RBP4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 SF3A3Q12874 501 aaKnown RBP eCLIP4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 GALNTL6Q49A17 601 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 LDHAL6AQ6ZMR3 332 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 GALNT15Q8N3T1 639 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 PIGKQ92643 395 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 ARHGAP39Q9C0H5 1083 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 MRPL44Q9H9J2 332 aaKnown RBP4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 G6PC2Q9NQR9 355 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 SLC22A11Q9NSA0 550 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 DECR2Q9NUI1 292 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 FBXO28Q9NVF7 368 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 MSRB1Q9NZV6 116 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 ZNF112Q9UJU3 913 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 VPS4AQ9UN37 437 aa4.99□□□□□ -1.61
PRPF40A-205ENST00000467114 TRBV5-3A0A0A0MS03 114 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 C4orf47A7E2U8 309 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 B9A039 149 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 F8W810 466 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 H0Y3Z8 333 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 EIF3JO75822 258 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 HEXIM1O94992 359 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 NDUFB8O95169 186 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 SGPL1O95470 568 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 PRKAA2P54646 552 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 SMAD1Q15797 465 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 PDCD2Q16342 344 aaPredicted RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 ZNF474Q6S9Z5 364 aaPredicted RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 RFX8Q6ZV50 586 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 RTL10Q7L3V2 364 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 RAB11FIP2Q7L804 512 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 TTC30AQ86WT1 665 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 HERC6Q8IVU3 1022 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 SLC44A5Q8NCS7 719 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 SPPL3Q8TCT6 385 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 TBC1D20Q96BZ9 403 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 SDCCAG3Q96C92 435 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 MSI2Q96DH6 328 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 FAR2Q96K12 515 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 ZPBPQ9BS86 351 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 PAPOLBQ9NRJ5 636 aaKnown RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 PROCRQ9UNN8 238 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 C19orf53Q9UNZ5 99 aaPredicted RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 COG5Q9UP83 839 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 RCE1Q9Y256 329 aa4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 HEMK1Q9Y5R4 338 aaPredicted RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 MORC2Q9Y6X9 1032 aaPredicted RBP4.98□□□□□ -1.61
PRPF40A-205ENST00000467114 A0A0G2JK05 382 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 hCG_1642624A0A1W2PR95 340 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 MBD3L5A6NJ08 208 aaPredicted RBP4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 LACTBL1A8MY62 500 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 SLC28A2O43868 658 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 SYF2O95926 243 aaKnown RBP4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 DHRS4L1P0CG22 281 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 PEPDP12955 493 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 TFEBP19484 476 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 TBXAS1P24557 533 aaPredicted RBP4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 AKT1P31749 480 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 PGGT1BP53609 377 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 TAS2R50P59544 299 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 MTA1Q13330 715 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 CNGA3Q16281 694 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 PRTGQ2VWP7 1150 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 ATPAF1Q5TC12 328 aaPredicted RBP4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 ANO1Q5XXA6 986 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 KLHL17Q6TDP4 642 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 C18orf65Q6ZTR6 163 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 KRT27Q7Z3Y8 459 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 MOGAT3Q86VF5 341 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 ADGRF3Q8IZF5 1079 aa4.97□□□□□ -1.61
PRPF40A-205ENST00000467114 CELF1Q92879 486 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms