RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 DPYSL2Q16555 572 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 GAB4Q2WGN9 574 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 ANO4Q32M45 955 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 SLC44A4Q53GD3 710 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 RABGAP1LQ5R372 815 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 MANEALQ5VSG8 457 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 FYB2Q5VWT5 728 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 MAP7D3Q8IWC1 876 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 UBALD2Q8IYN6 164 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 RCOR2Q8IZ40 523 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 C17orf53Q8N3J3 647 aaPredicted RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 CPA6Q8N4T0 437 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 HJURPQ8NCD3 748 aaPredicted RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 TRIM58Q8NG06 486 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 FAM71BQ8TC56 605 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 CSGALNACT1Q8TDX6 532 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 LRRN4Q8WUT4 740 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 RAPGEF5Q92565 580 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 KRT35Q92764 455 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 DNASE1L2Q92874 299 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 BHMTQ93088 406 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 PRICKLE1Q96MT3 831 aaPredicted RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 RPRD1AQ96P16 312 aaPredicted RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 ALS2CR12Q96Q35 445 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 KCTD15Q96SI1 283 aaPredicted RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 BBS2Q9BXC9 721 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 RETREG1Q9H6L5 497 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 DDX56Q9NY93 547 aaKnown RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 PLK2Q9NYY3 685 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 CWC15Q9P013 229 aaKnown RBP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 MARK1Q9P0L2 795 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 FBXO10Q9UK96 956 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 DUSP12Q9UNI6 340 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 PCDHA3Q9Y5H8 950 aa7.78□□□□□ -1.16
AC004540.1-206ENST00000448056 NUP210Q8TEM1 1887 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CUL9Q8IWT3 2517 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CCDC66A2RUB6 948 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 C3orf70A6NLC5 250 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 MIF4GDA9UHW6 222 aaKnown RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 RNF223E7ERA6 249 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 EEF2KO00418 725 aaKnown RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 KIF5CO60282 957 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CLDN11O75508 207 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CNTN5O94779 1100 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ZRANB2O95218 330 aaKnown RBP eCLIP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CD48P09326 243 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CISD3P0C7P0 127 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 RHOQP17081 205 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 GOT1P17174 413 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 KDELR1P24390 212 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CTNNA2P26232 953 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 HOXD9P28356 352 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 EPHB2P29323 1055 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 HOXC13P31276 330 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 HTR7P34969 479 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 GJA4P35212 333 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CTNNA1P35221 906 aaKnown RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 GJC1P36383 396 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 SLC6A11P48066 632 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 IRAK1P51617 712 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF135P52742 658 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CDH4P55283 916 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CDH6P55285 790 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 AMPD2Q01433 879 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF177Q13360 481 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 KRT81Q14533 505 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ALFQ53S48 1182 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 PPP6R3Q5H9R7 873 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ZNF569Q5MCW4 686 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ZFYVE27Q5T4F4 411 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 MEI1Q5TIA1 1274 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 TTC39BQ5VTQ0 682 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 RNF43Q68DV7 783 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 RWDD4Q6NW29 188 aaKnown RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 RFX8Q6ZV50 586 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CIR1Q86X95 450 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 KATNAL2Q8IYT4 538 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 UBL4BQ8N7F7 174 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 NAT16Q8N8M0 369 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 FIBINQ8TAL6 211 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ALG3Q92685 438 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 TBC1D31Q96DN5 1066 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CHFRQ96EP1 664 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 HES6Q96HZ4 224 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 XPO6Q96QU8 1125 aaKnown RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 UHRF1Q96T88 793 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 SLC2A11Q9BYW1 496 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 ZYG11BQ9C0D3 744 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 C8orf33Q9H7E9 229 aaPredicted RBP7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 PCDH18Q9HCL0 1135 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 HEBP1Q9NRV9 189 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 KLHL11Q9NVR0 708 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 MPP6Q9NZW5 540 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 STIM2Q9P246 746 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 WNT16Q9UBV4 365 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 MUTYHQ9UIF7 546 aa7.77□□□□□ -1.17
AC004540.1-206ENST00000448056 CLEC4EQ9ULY5 219 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms