RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 C9orf43Q8TAL5 461 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 PRCCQ92733 491 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 OTUB2Q96DC9 234 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 TCTN2Q96GX1 697 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 HEXIM2Q96MH2 286 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 SLC6A18Q96N87 628 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 CCDC94Q9BW85 323 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 SLC12A9Q9BXP2 914 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 C2orf40Q9H1Z8 148 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 IL25Q9H293 177 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 CHMP4BQ9H444 224 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 C6orf50Q9HD87 102 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 ZNF71Q9NQZ8 489 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 GDF3Q9NR23 364 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 MBNL3Q9NUK0 354 aaKnown RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 TNFSF13BQ9Y275 285 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 STON1Q9Y6Q2 735 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.48□□□□□ -1.85
PMS1-215ENST00000447232 U3KQA8 63 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 ATRQ13535 2644 aa3.48□□□□□ -1.85
PMS1-215ENST00000447232 SCN8AQ9UQD0 1980 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 STAB1Q9NY15 2570 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ZNF106Q9H2Y7 1883 aaKnown RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 A0A1W2PPC4 97 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 LYPLA2O95372 231 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SEMA4FO95754 770 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 RNASE1P07998 156 aaKnown RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 GIMD1P0DJR0 217 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SLC5A2P31639 672 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SLC6A4P31645 630 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 LIFRP42702 1097 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 BCAT1P54687 386 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 NXPH1P58417 271 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 KLRB1Q12918 225 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 STARD3Q14849 445 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SDHAF4Q5VUM1 108 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 BTBD8Q5XKL5 378 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 GRAMD4Q6IC98 578 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ATG4DQ86TL0 474 aaPredicted RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 FAM124AQ86V42 546 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 RAB11FIP4Q86YS3 637 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 TMTC2Q8N394 836 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SLC25A45Q8N413 288 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 OXR1Q8N573 874 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 OR4C6Q8NH72 309 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 GRIN3AQ8TCU5 1115 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 RNF38Q9H0F5 515 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 CDT1Q9H211 546 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ZSWIM4Q9H7M6 989 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 TTC12Q9H892 705 aaPredicted RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 EBF2Q9HAK2 575 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SSU72Q9NP77 194 aaKnown RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 RGL1Q9NZL6 768 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 TBC1D14Q9P2M4 693 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ENTPD4Q9Y227 616 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 CCDC69A6NI79 296 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ABLIM1O14639 778 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 WNT9AO14904 365 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 CACNG3O60359 315 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 PAGE1O75459 146 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 FSBPO95073 299 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 TDP2O95551 362 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 CEACAM5P06731 702 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ODC1P11926 461 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ACO1P21399 889 aaKnown RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 TGM2P21980 687 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 CD38P28907 300 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 RARRES1P49788 294 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 PDX1P52945 283 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 OSTNP61366 133 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 DAB2P98082 770 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 EPHA7Q15375 998 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ZBTB6Q15916 424 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 PFKFB3Q16875 520 aaPredicted RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 SLC10A6Q3KNW5 377 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 MANEAQ5SRI9 462 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 DSTYKQ6XUX3 929 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 VASH2Q86V25 355 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 HEATR4Q86WZ0 1026 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 TMEM25Q86YD3 366 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 MCEMP1Q8IX19 187 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 FSIP1Q8NA03 581 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SPATA3Q8NHX4 192 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SCFD1Q8WVM8 642 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 SKA1Q96BD8 255 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 P2RY11Q96G91 374 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 LURAP1Q96LR2 239 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 RPF1Q9H9Y2 349 aaKnown RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 SPHK2Q9NRA0 654 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ANKEF1Q9NU02 776 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 TMLHEQ9NVH6 421 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 CFAP97Q9P2B7 532 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 LRWD1Q9UFC0 647 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ERRFI1Q9UJM3 462 aaPredicted RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 CPQQ9Y646 472 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 ARHGEF17Q96PE2 2063 aaPredicted RBP3.47□□□□□ -1.85
PMS1-215ENST00000447232 DOCK9Q9BZ29 2069 aa3.47□□□□□ -1.85
PMS1-215ENST00000447232 DCHS2Q6V1P9 2916 aa3.46□□□□□ -1.85
PMS1-215ENST00000447232 CCDC187A0A096LP49 1063 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms