RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TIMM44O43615 452 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 OPHN1O60890 802 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 DAB1O75553 588 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 SEMA4FO95754 770 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 APOEP02649 317 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 POLR2EP19388 210 aaKnown RBP12.18□□□□□ -0.46
HDAC4-202ENST00000430200 DPP6P42658 865 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 KLK7P49862 253 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 SIM1P81133 766 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-202ENST00000430200 ARID5AQ03989 594 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 KCNJ12Q14500 433 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 RAB6CQ53S08 254 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 C9orf64Q5T6V5 341 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 C14orf80Q86SX3 495 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 FAM71AQ8IYT1 594 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 CCAR2Q8N163 923 aaKnown RBP12.18□□□□□ -0.46
HDAC4-202ENST00000430200 MLKLQ8NB16 471 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 SNX19Q92543 992 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 FOXJ1Q92949 421 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 ALG14Q96F25 216 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 PPP1R13BQ96KQ4 1090 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 NAA15Q9BXJ9 866 aaKnown RBP12.18□□□□□ -0.46
HDAC4-202ENST00000430200 RAB6CQ9H0N0 254 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 PABPC3Q9H361 631 aaKnown RBP12.18□□□□□ -0.46
HDAC4-202ENST00000430200 NDST4Q9H3R1 872 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 DDIT4Q9NX09 232 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 BTBD3Q9Y2F9 522 aa12.18□□□□□ -0.46
HDAC4-202ENST00000430200 COL27A1Q8IZC6 1860 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-202ENST00000430200 TDRD6O60522 2096 aaKnown RBP12.17□□□□□ -0.46
HDAC4-202ENST00000430200 CAPN9O14815 690 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 WNT9AO14904 365 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 MID1O15344 667 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 BCAT2O15382 392 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-202ENST00000430200 ZBTB24O43167 697 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-202ENST00000430200 CBFA2T3O75081 653 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 ACADMP11310 421 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 PDGFRAP16234 1089 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 CSNK1EP49674 416 aaKnown RBP12.17□□□□□ -0.46
HDAC4-202ENST00000430200 VWA3BQ502W6 1294 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 WDR45BQ5MNZ6 344 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 SYCP2LQ5T4T6 812 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 ZNF776Q68DI1 518 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-202ENST00000430200 FBXL22Q6P050 247 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 UNQ6494/PRO21346Q6UXR6 183 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 SLC26A9Q7LBE3 791 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
HDAC4-202ENST00000430200 NAXDQ8IW45 347 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 ZNF683Q8IZ20 524 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 BAHD1Q8TBE0 780 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-202ENST00000430200 GPT2Q8TD30 523 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 BTN2A3PQ96KV6 586 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 FAM129BQ96TA1 746 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 TUBGCP2Q9BSJ2 902 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 NUP58Q9BVL2 599 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 IRX2Q9BZI1 471 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-202ENST00000430200 NUP62CLQ9H1M0 184 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 GANQ9H2C0 597 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 TM9SF3Q9HD45 589 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 LMBRD1Q9NUN5 540 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 TAB2Q9NYJ8 693 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 SUSD2Q9UGT4 822 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 NFE2L3Q9Y4A8 694 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 OR51B4Q9Y5P0 310 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 HS3ST4Q9Y661 456 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 BPTFQ12830 3046 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 FAM208BQ5VWN6 2430 aa12.17□□□□□ -0.46
HDAC4-202ENST00000430200 A0A1W2PP55 124 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 KCNK3O14649 394 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 HSF2BPO75031 334 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 CNTN5O94779 1100 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 ADCY5O95622 1261 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 FGFR1OPO95684 399 aaKnown RBP12.16□□□□□ -0.46
HDAC4-202ENST00000430200 WNT1P04628 370 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 ATP5BP06576 529 aaKnown RBP12.16□□□□□ -0.46
HDAC4-202ENST00000430200 PRKCSHP14314 528 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-202ENST00000430200 OXTRP30559 389 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 CDH5P33151 784 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-202ENST00000430200 DRD3P35462 400 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 FLT3P36888 993 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 PSMD8P48556 350 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 ATXN3P54252 364 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-202ENST00000430200 PPP2CBP62714 309 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 PPP2CAP67775 309 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 NME3Q13232 169 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 RAPGEF1Q13905 1077 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 DRAP1Q14919 205 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-202ENST00000430200 CST6Q15828 149 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 KIF19Q2TAC6 998 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 OR6B2Q6IFH4 312 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 RABEPKQ7Z6M1 372 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 MMAAQ8IVH4 418 aaKnown RBP12.16□□□□□ -0.46
HDAC4-202ENST00000430200 STK40Q8N2I9 435 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 HDDC3Q8N4P3 179 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 PNPLA1Q8N8W4 532 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 FRS2Q8WU20 508 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 SLC20A1Q8WUM9 679 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 PTPRN2Q92932 1015 aa12.16□□□□□ -0.46
HDAC4-202ENST00000430200 SLC6A18Q96N87 628 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms