RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 MAPK1P28482 360 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 CNTN1Q12860 1018 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 LONRF1Q17RB8 773 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 SDHAF4Q5VUM1 108 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ACTL9Q8TC94 416 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 A0A088AWK7 358 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 KPNA5O15131 536 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 AMD1P17707 334 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF10P21506 573 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 INPP1P49441 399 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 GJA9P57773 515 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 FUT2Q10981 343 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 BOP1Q14137 746 aaKnown RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF655Q8N720 491 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ACTRT1Q8TDG2 376 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ROPN1BQ9BZX4 212 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ARHGAP39Q9C0H5 1083 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ROPN1Q9HAT0 212 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ARHGAP28Q9P2N2 729 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 NCF1BA6NI72 391 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 USP27XA6NNY8 438 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 NCF1CA8MVU1 366 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 NCF1P14598 390 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 TEAD4Q15561 434 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 ECM1Q16610 540 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 MMGT1Q8N4V1 131 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 PNKPQ96T60 521 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 MLPHQ9BV36 600 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-206ENST00000421141 GOLGA2P5Q9HBQ8 144 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 PCDH9Q9HC56 1237 aa10.97□□□□□ -0.65
PTCH1-206ENST00000421141 A0A1W2PQH9 124 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 TRDMT1O14717 391 aaKnown RBP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 MGEA5O60502 916 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 DDX6P26196 483 aaKnown RBP eCLIP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 SERPINH1P50454 418 aaKnown RBP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 SPANXN3Q5MJ09 141 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 KREMEN2Q8NCW0 462 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 ZNF333Q96JL9 665 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 HNRNPCL2B2RXH8 293 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 OPLAHO14841 1288 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 CHUKO15111 745 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 HNRNPCL1O60812 293 aaKnown RBP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 HPGDP15428 266 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 NPY2RP49146 381 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 CCZ1BP86790 482 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 CCZ1P86791 482 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 EEF1DP3Q658K8 133 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 ING5Q8WYH8 240 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 ATG4AQ8WYN0 398 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 ABHD8Q96I13 439 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 SLC9A7Q96T83 725 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 TAS2R13Q9NYV9 303 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 GPSM3Q9Y4H4 160 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 H3BMM5 538 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 EEF1B2P24534 225 aaKnown RBP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 CORO1AP31146 461 aaKnown RBP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 ARSHQ5FYA8 562 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 TPGS2Q68CL5 300 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 MCOLN3Q8TDD5 553 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 MCCC1Q96RQ3 725 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 FANCEQ9HB96 536 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 EIF3LQ9Y262 564 aaKnown RBP10.96□□□□□ -0.65
PTCH1-206ENST00000421141 BCORQ6W2J9 1755 aa10.96□□□□□ -0.65
PTCH1-206ENST00000421141 TBC1D3DA0A087WVF3 549 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3IA0A087WXS9 549 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3EA0A087X179 549 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3KA0A087X1G2 549 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3FA6NER0 549 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3LB9A6J9 549 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 QSOX1O00391 747 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 PER2O15055 1255 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 RAD51BO15315 384 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3HP0C7X1 549 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TIGD5Q53EQ6 642 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3GQ6DHY5 549 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3CQ6IPX1 549 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 MTSS1LQ765P7 747 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 OTOP3Q7RTS5 596 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 PATL1Q86TB9 770 aaKnown RBP10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TBC1D3Q8IZP1 549 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-206ENST00000421141 CXorf38Q8TB03 319 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 GABRQQ9UN88 632 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 SBF2Q86WG5 1849 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 EVPLLA8MZ36 301 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 SCAMP3O14828 347 aaKnown RBP10.96□□□□□ -0.66
PTCH1-206ENST00000421141 CCNB1P14635 433 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 KELP23276 732 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 SLC8A1P32418 973 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 MPP3Q13368 585 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 SLC25A52Q3SY17 297 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.66
PTCH1-206ENST00000421141 SLC22A9Q8IVM8 553 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 PXYLP1Q8TE99 480 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 REPS1Q96D71 796 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 DUSP9Q99956 384 aaKnown RBP10.96□□□□□ -0.66
PTCH1-206ENST00000421141 TMEM175Q9BSA9 504 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 ABCG4Q9H172 646 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 GMIPQ9P107 970 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 APPL1Q9UKG1 709 aa10.96□□□□□ -0.66
PTCH1-206ENST00000421141 RBP1P09455 135 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms