RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SCD5Q86SK9 330 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 C14orf80Q86SX3 495 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLEC14AQ86T13 490 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TRIM69Q86WT6 500 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCDC117Q8IWD4 279 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 FAM217AQ8IXS0 508 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCDC65Q8IXS2 484 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 C12orf29Q8N999 325 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 KDM1BQ8NB78 822 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZSCAN1Q8NBB4 408 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 XXYLT1Q8NBI6 393 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 WDR48Q8TAF3 677 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZNF564Q8TBZ8 553 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 IFI44Q8TCB0 444 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 RNF139Q8WU17 664 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TAF4BQ92750 862 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 EXTL1Q92935 676 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 TTC17Q96AE7 1141 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ARRDC3Q96B67 414 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PLD4Q96BZ4 506 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 DNAJC19Q96DA6 116 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CYFIP2Q96F07 1278 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 IFT43Q96FT9 208 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 LIN37Q96GY3 246 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 MYO19Q96H55 970 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PRR11Q96HE9 360 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 EPSTI1Q96J88 318 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 APOLD1Q96LR9 279 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PSMG3-AS1Q96PY0 264 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CGRRF1Q99675 332 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 DDX50Q9BQ39 737 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 NT5C1AQ9BXI3 368 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 DUSP16Q9BY84 665 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 IRX2Q9BZI1 471 aaPredicted RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 LRRC27Q9C0I9 530 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SDCBP2Q9H190 292 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ADNPQ9H2P0 1102 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 KDM4CQ9H3R0 1056 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 MTG2Q9H4K7 406 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 OLA1Q9NTK5 396 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 UCKL1Q9NWZ5 548 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 GEMIN8Q9NWZ8 242 aaKnown RBP2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 KCNK4Q9NYG8 393 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 NLGN3Q9NZ94 848 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 HSPBP1Q9NZL4 362 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 NCKIPSDQ9NZQ3 722 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 SEPT10Q9P0V9 454 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CYTH4Q9UIA0 394 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ANAPC2Q9UJX6 822 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 STOML2Q9UJZ1 356 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 MAN2B2Q9Y2E5 1009 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CEP83Q9Y592 693 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PCDHB11Q9Y5F2 797 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PCDHGA7Q9Y5G6 932 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ENTPD2Q9Y5L3 495 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 USP3Q9Y6I4 520 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCDC168Q8NDH2 2452 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 ANAPC1Q9H1A4 1944 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 PCNX1Q96RV3 2341 aa2.46□□□□□ -2.02
RNU4-53P-201ENST00000410828 UBE4BO95155 1302 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 TSC2P49815 1807 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 KIAA1549LQ6ZVL6 1849 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 CENPEQ02224 2701 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 ITPR2Q14571 2701 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 SETD2Q9BYW2 2564 aaPredicted RBP2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 CEP192Q8TEP8 1941 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 ABCA2Q9BZC7 2435 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 CCDC187A0A096LP49 1063 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 LY6G6EA0A0G2JKS1 128 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 A0A1W2PNU3 283 aaPredicted RBP2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 FRMD3A2A2Y4 597 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 BLACEA4D250 179 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLEC18AA5D8T8 446 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 TTC34A8MYJ7 566 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 C1QTNF3-AMACRE9PGA6 284 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 H3BM21 787 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 TMX2-CTNND1H3BSU7 103 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 TPP1O14773 563 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 PLD2O14939 933 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 CLIC2O15247 247 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 EIF3DO15371 548 aaKnown RBP eCLIP2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 NVLO15381 856 aaKnown RBP2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 SLC31A1O15431 190 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 IRAK2O43187 625 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 PLRG1O43660 514 aaKnown RBP2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 NOBOXO60393 691 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 EXOC3O60645 756 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 RTN2O75298 545 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 NEBLO76041 1014 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 ZBED1O96006 694 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 CENPBP07199 599 aaPredicted RBP2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 PRR29P0C7W0 189 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 GIMD1P0DJR0 217 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 LIPCP11150 499 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 PRLRP16471 622 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 TGM2P21980 687 aa2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 HNRNPA2B1P22626 353 aaKnown RBP2.45□□□□□ -2.02
RNU4-53P-201ENST00000410828 MZF1P28698 734 aaPredicted RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms