RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 MCEEQ96PE7 176 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 HAPLN3Q96S86 360 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 GVINP1Q7Z2Y8 2422 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 SDK1Q7Z5N4 2213 aa18.5■□□□□ 0.55
PDLIM2-206ENST00000409141 MAP3K13O43283 966 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 RTN2O75298 545 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 CLDN11O75508 207 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 ASLP04424 464 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 SERPING1P05155 500 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 RETP07949 1114 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 HLA-EP13747 358 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 NDUFV2P19404 249 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 PRKCHP24723 683 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 ADRA1BP35368 520 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 IRAK1P51617 712 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 OXCT1P55809 520 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 ST8SIA6P61647 398 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 RPL7AP62424 266 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 SLC12A1Q13621 1099 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 ELF2Q15723 593 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 PLK5Q496M5 336 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 HGSNATQ68CP4 663 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 C11orf74Q86VG3 221 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 DNAAF5Q86Y56 855 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 APCDD1Q8J025 514 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 ZC3H10Q96K80 434 aaKnown RBP18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 SPACA7Q96KW9 195 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 DUSP15Q9H1R2 295 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 PARVAQ9NVD7 372 aa18.49■□□□□ 0.55
PDLIM2-206ENST00000409141 USP34Q70CQ2 3546 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 DRGXA6NNA5 263 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 SRGAP2O75044 1071 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 CNTN5O94779 1100 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 RHOBTB1O94844 696 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 P2RY2P41231 377 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 ZNF143P52747 638 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 CDH4P55283 916 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 PLEKHG6Q3KR16 790 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 PPP1R15BQ5SWA1 713 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 SPECC1LQ69YQ0 1117 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 VPS36Q86VN1 386 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 ZNF366Q8N895 744 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 MRGPRX1Q96LB2 322 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 PPP1R9BQ96SB3 815 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 SLC6A17Q9H1V8 727 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 TMEM245Q9H330 911 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 ADAMTS1Q9UHI8 967 aa18.48■□□□□ 0.55
PDLIM2-206ENST00000409141 E9PAM4 449 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 ATMINO43313 823 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 DESP17661 470 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 MZF1P28698 734 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 CTSOP43234 321 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 HDAC4P56524 1084 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 MAMLD1Q13495 774 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 MAP7D1Q3KQU3 841 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 PLEKHA7Q6IQ23 1121 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 CXorf57Q6NSI4 855 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 KIAA1324Q6UXG2 1013 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 ZNF683Q8IZ20 524 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 FRMD1Q8N878 549 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 LOXL4Q96JB6 756 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 CNPY3Q9BT09 278 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 PRDM16Q9HAZ2 1276 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 SUN2Q9UH99 717 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 ERVW-1Q9UQF0 538 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 EML5Q05BV3 1969 aa18.47■□□□□ 0.55
PDLIM2-206ENST00000409141 CCP110O43303 1012 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 ZNF217O75362 1048 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 BCKDHBP21953 392 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 NUMBP49757 651 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 PLK1P53350 603 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 ECT2LQ008S8 904 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 ALFQ53S48 1182 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 RNF219Q5W0B1 726 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 SCYL2Q6P3W7 929 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 TMPRSS6Q8IU80 811 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 KIAA2013Q8IYS2 634 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 MKRN2Q9H000 416 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 MPP6Q9NZW5 540 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 CNOT8Q9UFF9 292 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 OR12D3Q9UGF7 316 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 TBC1D30Q9Y2I9 924 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 ZNF292O60281 2723 aa18.46■□□□□ 0.55
PDLIM2-206ENST00000409141 IGLV3-10A0A075B6K4 115 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 SRPRAP08240 638 aaKnown RBP18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 PLEKP08567 350 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 SULT2A1Q06520 285 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 SPEM2Q0P670 501 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 CAMK2GQ13555 558 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 TRIM14Q14142 442 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 VSTM4Q8IW00 320 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 GPR161Q8N6U8 529 aaKnown RBP18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 CCDC185Q8N715 623 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 KDM1BQ8NB78 822 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 OR52K2Q8NGK3 314 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 PRCCQ92733 491 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 ZNF653Q96CK0 615 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 TRIM11Q96F44 468 aa18.46■□□□□ 0.54
PDLIM2-206ENST00000409141 SIPA1Q96FS4 1042 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms