RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 DNA2P51530 1060 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 IL2P60568 153 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 MBTPS1Q14703 1052 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 CRYBG2Q8N1P7 616 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 WDTC1Q8N5D0 677 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 RNF169Q8NCN4 708 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 SMRP1Q8NCR6 262 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 FEZF2Q8TBJ5 459 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 KBTBD7Q8WVZ9 684 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 FUBP3Q96I24 572 aaKnown RBP eCLIP9.13□□□□□ -0.95
TPM3-213ENST00000368545 FANCD2OSQ96PS1 177 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 MENTQ9BUN1 341 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 ARGLU1Q9NWB6 273 aaPredicted RBP9.13□□□□□ -0.95
TPM3-213ENST00000368545 TSPAN16Q9UKR8 245 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 TTC7AQ9ULT0 858 aaPredicted RBP9.13□□□□□ -0.95
TPM3-213ENST00000368545 L1RE1Q9UN81 338 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 TECTAO75443 2155 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 TCRBV5S1A1TA0A578 114 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 TMEM110-MUSTN1A8MSY1 372 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 CYB561D2O14569 222 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 SNRPB2P08579 225 aaKnown RBP9.13□□□□□ -0.95
TPM3-213ENST00000368545 MCM3P25205 808 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 GPD2P43304 727 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 GABRB2P47870 512 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 AARSP49588 968 aaKnown RBP eCLIP9.13□□□□□ -0.95
TPM3-213ENST00000368545 NEK3P51956 506 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 PDCLQ13371 301 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 TUSC3Q13454 348 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 PPP2R5DQ14738 602 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 UPP1Q16831 310 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 RSPO4Q2I0M5 234 aaPredicted RBP9.13□□□□□ -0.95
TPM3-213ENST00000368545 GOLGA7BQ2TAP0 167 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 INAVAQ3KP66 663 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 PTPN20Q4JDL3 420 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 SLC35F1Q5T1Q4 408 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 DENND5AQ6IQ26 1287 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 GLB1LQ6UWU2 654 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 EP400NLQ6ZTU2 488 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 USP53Q70EK8 1073 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 MMGT1Q8N4V1 131 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 SPATA4Q8NEY3 305 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 URGCPQ8TCY9 931 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 RSPH1Q8WYR4 309 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 CD101Q93033 1021 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 ELAC1Q9H777 363 aaKnown RBP9.13□□□□□ -0.95
TPM3-213ENST00000368545 SYNCQ9H7C4 482 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.13□□□□□ -0.95
TPM3-213ENST00000368545 ST8SIA5O15466 376 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 CEP104O60308 925 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 PROSCO94903 275 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 FKBP9O95302 570 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 MT-CO1P00395 513 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 ALBP02768 609 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 LHX1P48742 406 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 NDUFV1P49821 464 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 CLCNKBP51801 687 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 BCAT1P54687 386 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 FAM189BP81408 668 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 SHC2P98077 582 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 DSG1Q02413 1049 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 CYP4F3Q08477 520 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 HYAL1Q12794 435 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 ZNF268Q14587 947 aaPredicted RBP9.12□□□□□ -0.95
TPM3-213ENST00000368545 HP1BP3Q5SSJ5 553 aaPredicted RBP9.12□□□□□ -0.95
TPM3-213ENST00000368545 SEL1L2Q5TEA6 688 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 DCUN1D2Q6PH85 259 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 KCNT2Q6UVM3 1135 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 FKBP9P1Q75LS8 142 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 ACOT1Q86TX2 421 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 PDCL2Q8N4E4 241 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 FNIP1Q8TF40 1166 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 SENP8Q96LD8 212 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 CPXM1Q96SM3 734 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 MFSD1Q9H3U5 465 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 NOL6Q9H6R4 1146 aaKnown RBP9.12□□□□□ -0.95
TPM3-213ENST00000368545 MIOSQ9NXC5 875 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 CHORDC1Q9UHD1 332 aaPredicted RBP9.12□□□□□ -0.95
TPM3-213ENST00000368545 DSEQ9UL01 958 aa9.12□□□□□ -0.95
TPM3-213ENST00000368545 TARSL2A2RTX5 802 aaKnown RBP9.11□□□□□ -0.95
TPM3-213ENST00000368545 LCHNA4D1U4 455 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 TMEM191CA6NGB0 347 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 CASTOR2A6NHX0 329 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 CCDC188H7C350 402 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 PSTPIP1O43586 416 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 ODC1P11926 461 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 RWDD2BP57060 319 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 C2orf54Q08AI8 447 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 BST2Q10589 180 aaKnown RBP9.11□□□□□ -0.95
TPM3-213ENST00000368545 PIGHQ14442 188 aaPredicted RBP9.11□□□□□ -0.95
TPM3-213ENST00000368545 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 GLE1Q53GS7 698 aaKnown RBP9.11□□□□□ -0.95
TPM3-213ENST00000368545 C2CD6Q53TS8 623 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 ZFYVE27Q5T4F4 411 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 DSTYKQ6XUX3 929 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 NIPA2Q8N8Q9 360 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 DTWD2Q8NBA8 298 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 NOA1Q8NC60 698 aaKnown RBP9.11□□□□□ -0.95
TPM3-213ENST00000368545 LINC01599Q8WXQ3 324 aa9.11□□□□□ -0.95
TPM3-213ENST00000368545 SUSD6Q92537 303 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms