RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 C6orf52Q5T4I8 152 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 AGBL3Q8NEM8 1001 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 APBB2Q92870 758 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 SLC7A6OSQ96CW6 309 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-201ENST00000361866 CPNE1Q99829 537 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 NUDT5Q9UKK9 219 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 SORCS3Q9UPU3 1222 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 LRRC42Q9Y546 428 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 AP4S1Q9Y587 144 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 CLUHO75153 1309 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 PLIN4Q96Q06 1357 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 M0R3G1 203 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 CLOCKO15516 846 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 EDIL3O43854 480 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 MAGEC1O60732 1142 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 CYP2C9P11712 490 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 TPP2P29144 1249 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-201ENST00000361866 GRIA3P42263 894 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 PPM1FP49593 454 aaPredicted RBP14.19□□□□□ -0.14
COL6A1-201ENST00000361866 FAM83AQ86UY5 434 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 KIAA0319LQ8IZA0 1049 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 TSPAN14Q8NG11 270 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 AZIN2Q96A70 460 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 ACO2Q99798 780 aaKnown RBP14.19□□□□□ -0.14
COL6A1-201ENST00000361866 GID8Q9NWU2 228 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 TSC22D4Q9Y3Q8 395 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 LAMA4Q16363 1823 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 RGSL1A5PLK6 1076 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 YDJCA8MPS7 323 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 SPTLC1O15269 473 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 GABRB2P47870 512 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 ARHGDIAP52565 204 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 BST2Q10589 180 aaKnown RBP14.19□□□□□ -0.14
COL6A1-201ENST00000361866 CTBP1Q13363 440 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 DHFR2Q86XF0 187 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 APOBEC3FQ8IUX4 373 aaKnown RBP14.19□□□□□ -0.14
COL6A1-201ENST00000361866 EGFL6Q8IUX8 553 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 NDRG1Q92597 394 aaKnown RBP14.19□□□□□ -0.14
COL6A1-201ENST00000361866 NDFIP2Q9NV92 336 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 CROTQ9UKG9 612 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 PCDHA11Q9Y5I1 949 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 HDAC3O15379 428 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 TGDSO95455 350 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 PIK3R1P27986 724 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 CDK7P50613 346 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 RHBDF2Q6PJF5 856 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 OR6J1Q8NGC5 347 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 SLC35B2Q8TB61 432 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 TSPAN17Q96FV3 270 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 THUMPD3Q9BV44 507 aaKnown RBP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 MYH11P35749 1972 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 SMIM31A0A1B0GVY4 71 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 F8W8V4 182 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 C2P06681 752 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 TSPY1Q01534 308 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 NFYCQ13952 458 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 KYAT1Q16773 422 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 FBXO47Q5MNV8 452 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 PPP1R26Q5T8A7 1209 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 XYLT1Q86Y38 959 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 MYO1HQ8N1T3 1032 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 SNX31Q8N9S9 440 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 DACT3Q96B18 629 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 ZFRQ96KR1 1074 aaKnown RBP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 C7orf26Q96N11 449 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 ST6GALNAC4Q9H4F1 302 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 NSMCE4AQ9NXX6 385 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 TMEM216Q9P0N5 145 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 MYO1GB0I1T2 1018 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 RGL2O15211 777 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 MTSS1O43312 755 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 GAS2O43903 313 aaKnown RBP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 CD4P01730 458 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 ATXN1P54253 815 aaKnown RBP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 SIX1Q15475 284 aaPredicted RBP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 DLG2Q15700 870 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 SLC39A4Q6P5W5 647 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 NAT8LQ8N9F0 302 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 DDX1Q92499 740 aaKnown RBP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 DCUN1D1Q96GG9 259 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 RBM22Q9NW64 420 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL6A1-201ENST00000361866 MYH3P11055 1940 aa14.18□□□□□ -0.14
COL6A1-201ENST00000361866 IVDP26440 423 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ZFP1Q6P2D0 407 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 DCAKDQ8WVC6 231 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 DGCR14Q96DF8 476 aaKnown RBP14.17□□□□□ -0.14
COL6A1-201ENST00000361866 CEP19Q96LK0 163 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 PHF12Q96QT6 1004 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 RUBCNLQ9H714 662 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 UBQLN1Q9UMX0 589 aaKnown RBP14.17□□□□□ -0.14
COL6A1-201ENST00000361866 POMPQ9Y244 141 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ANKRD12Q6UB98 2062 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ASB14A6NK59 587 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 BUD23O43709 281 aaKnown RBP14.17□□□□□ -0.14
COL6A1-201ENST00000361866 NDUFS3O75489 264 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 NR2C2P49116 596 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ACTR3P61158 418 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 LRRC8BQ6P9F7 803 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 ADCK1Q86TW2 530 aa14.17□□□□□ -0.14
COL6A1-201ENST00000361866 SLC41A1Q8IVJ1 513 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms