RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DOCK8Q8NF50 2099 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 FAM187AA6NFU0 413 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 HACD1B0YJ81 288 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 TRDMT1O14717 391 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 SCAMP3O14828 347 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CTIFO43310 598 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CNTN5O94779 1100 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 ECEL1O95672 775 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 RBP3P10745 1247 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 PTGIRP43119 386 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 KCNJ1P48048 391 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CDH4P55283 916 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 GALNT2Q10471 571 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 PDK1Q15118 436 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 AFMIDQ63HM1 303 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CIR1Q86X95 450 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 UMODL1-AS1Q8N2C9 162 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 SMRP1Q8NCR6 262 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 SMARCD2Q92925 531 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CCDC114Q96M63 670 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 LRRC1Q9BTT6 524 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 FEZ2Q9UHY8 353 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 ZFP37Q9Y6Q3 630 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 BRWD1Q9NSI6 2320 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 A0A1B0GVM2 712 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 BCLAF3A2AJT9 711 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 TCAF2A6NFQ2 919 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 H7C0C1 242 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 NCAM2O15394 837 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CLDN11O75508 207 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 ZNF189O75820 626 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 MX2P20592 715 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CHKAP35790 457 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 ATP5OP48047 213 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 SGSHP51688 502 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 NDST2P52849 883 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 RPS24P62847 133 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 SLC45A4Q5BKX6 768 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 SYDE1Q6ZW31 735 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 TFAP2DQ7Z6R9 452 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 JAMLQ86YT9 394 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 ARHGAP12Q8IWW6 846 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CFAP52Q8N1V2 620 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 NECTIN4Q96NY8 510 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 BRD8Q9H0E9 1235 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 OBP2AQ9NY56 170 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 TBC1D14Q9P2M4 693 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 CD207Q9UJ71 328 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 ZNF148Q9UQR1 794 aa10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 V9GYY5 206 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-201ENST00000327028 TYW5A2RUC4 315 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 CFAP69A5D8W1 941 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TTI1O43156 1089 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TSPAN3O60637 253 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 MAP3K6O95382 1288 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 GAS8O95995 478 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TERF1P54274 439 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 PRKD1Q15139 912 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 DARS2Q6PI48 645 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 ZC3H18Q86VM9 953 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TDRD5Q8NAT2 981 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 MYLIPQ8WY64 445 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 OTUB2Q96DC9 234 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 CDX2Q99626 313 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 NOL6Q9H6R4 1146 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 NDFIP2Q9NV92 336 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 NYNRINQ9P2P1 1898 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 CHD5Q8TDI0 1954 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TARSL2A2RTX5 802 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 SLC9A3R1O14745 358 aaPredicted RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 RHOXF2BP0C7M4 288 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 FCARP24071 287 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 ERCC6LQ2NKX8 1250 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 MPPE1Q53F39 396 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 RNF43Q68DV7 783 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TP53INP2Q8IXH6 220 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TFB1MQ8WVM0 346 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 SUSD6Q92537 303 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 RUBCNQ92622 972 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 HDAC11Q96DB2 347 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 RSPRY1Q96DX4 576 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 CELF6Q96J87 481 aaKnown RBP10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 MYADMQ96S97 322 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 RHOXF2Q9BQY4 288 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TMEM121Q9BTD3 319 aa10.52□□□□□ -0.73
VIPAS39-201ENST00000327028 TBL1XO60907 577 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 HEXIM1O94992 359 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 OR1E1P30953 314 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 GARSP41250 739 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 VIPR2P41587 438 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 PPIDQ08752 370 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 PTK6Q13882 451 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 PARP15Q460N3 678 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 MPP7Q5T2T1 576 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 GSTA5Q7RTV2 222 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 LRRC49Q8IUZ0 686 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms