RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 BTN3A3O00478 584 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 CHRM3P20309 590 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 JAK1P23458 1154 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 EIF4BP23588 611 aaKnown RBP8.36□□□□□ -1.07
VPS41-202ENST00000310301 NCOA4Q13772 614 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 TAB1Q15750 504 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 USP39Q53GS9 565 aaKnown RBP8.36□□□□□ -1.07
VPS41-202ENST00000310301 RIPOR1Q6ZS17 1223 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 DHFR2Q86XF0 187 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 WDR36Q8NI36 951 aaKnown RBP8.36□□□□□ -1.07
VPS41-202ENST00000310301 ZSCAN18Q8TBC5 510 aaPredicted RBP8.36□□□□□ -1.07
VPS41-202ENST00000310301 ANKRD49Q8WVL7 239 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 PYDC1Q8WXC3 89 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 VPS33AQ96AX1 596 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 CDK5RAP1Q96SZ6 601 aaKnown RBP8.36□□□□□ -1.07
VPS41-202ENST00000310301 SLC9A7Q96T83 725 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 DGCR6LQ9BY27 220 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 SEMA4AQ9H3S1 761 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 CYP4F12Q9HCS2 524 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 SPASTQ9UBP0 616 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 BTBD3Q9Y2F9 522 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 PCDHB2Q9Y5E7 798 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 UMODL1Q5DID0 1318 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 ATG7O95352 703 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 IL6P05231 212 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 FAM153BP0C7A2 387 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 SYN1P17600 705 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 RGS4P49798 205 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 AKR1D1P51857 326 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 ZNF844Q08AG5 666 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 FAM153CQ494X1 144 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 ACAD10Q6JQN1 1059 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 CNKSR3Q6P9H4 555 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 DENND5BQ6ZUT9 1274 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 KRT73Q86Y46 540 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 TFB1MQ8WVM0 346 aaKnown RBP8.36□□□□□ -1.07
VPS41-202ENST00000310301 PABPC5Q96DU9 382 aaKnown RBP8.36□□□□□ -1.07
VPS41-202ENST00000310301 FOPNLQ96NB1 174 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 ARHGAP39Q9C0H5 1083 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 NRDE2Q9H7Z3 1164 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 POLR1BQ9H9Y6 1135 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 TUBA8Q9NY65 449 aaPredicted RBP8.36□□□□□ -1.07
VPS41-202ENST00000310301 CLIC5Q9NZA1 410 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 ARMCX1Q9P291 453 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 SLC24A2Q9UI40 661 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 NAGPAQ9UK23 515 aa8.36□□□□□ -1.07
VPS41-202ENST00000310301 BTAF1O14981 1849 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 AP5Z1O43299 807 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 AKT1P31749 480 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 GJA8P48165 433 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 SLC1A6P48664 564 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 PURAQ00577 322 aaKnown RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 MTFR1Q15390 333 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 PGS1Q32NB8 556 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 FAM98BQ52LJ0 330 aaKnown RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 ZC2HC1CQ53FD0 456 aaPredicted RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 ZFP1Q6P2D0 407 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 MMADHCQ9H3L0 296 aaPredicted RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 FAM49BQ9NUQ9 324 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 EVA1BQ9NVM1 165 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 ZNF624Q9P2J8 865 aaPredicted RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 PGAP2Q9UHJ9 254 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 CORO1CQ9ULV4 474 aaPredicted RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 RNF112Q9ULX5 631 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 PLAGL2Q9UPG8 496 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 SF3B1O75533 1304 aaKnown RBP eCLIP8.35□□□□□ -1.071e-8■■■■■ 51.8
VPS41-202ENST00000310301 SLCO1B7G3V0H7 640 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 OPLAHO14841 1288 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 CPA3P15088 417 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 ITGAXP20702 1163 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 PTDSS1P48651 473 aaKnown RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 LHX1P48742 406 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 NPEPPSP55786 919 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 CSNK2BP67870 215 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 NOMO2Q5JPE7 1267 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 NEK10Q6ZWH5 1172 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 UNC45BQ8IWX7 931 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 POU5F2Q8N7G0 328 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 UTP15Q8TED0 518 aaKnown RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 FNIP1Q8TF40 1166 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 CCDC126Q96EE4 140 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 BDH2Q9BUT1 245 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 ATP6V1HQ9UI12 483 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 DUSP12Q9UNI6 340 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 RPS6KL1Q9Y6S9 549 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 PGM3O95394 542 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 FDFT1P37268 417 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 IFI35P80217 286 aaPredicted RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 LAMTOR4Q0VGL1 99 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 ZNF284Q2VY69 593 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 PABPC1LQ4VXU2 614 aaKnown RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.35□□□□□ -1.07
VPS41-202ENST00000310301 NT5DC4Q86YG4 428 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 ARHGEF19Q8IW93 802 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 ZNF557Q8N988 423 aaPredicted RBP8.35□□□□□ -1.07
VPS41-202ENST00000310301 OSCP1Q8WVF1 389 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 ARNTL2Q8WYA1 636 aa8.35□□□□□ -1.07
VPS41-202ENST00000310301 TSPAN18Q96SJ8 248 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms