RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 FERD3LQ96RJ6 166 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 TSPAN18Q96SJ8 248 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 CAAP1Q9H8G2 361 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 NMRAL1Q9HBL8 299 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 POLG2Q9UHN1 485 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 SHOC2Q9UQ13 582 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 UBIAD1Q9Y5Z9 338 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 A0A087X0T9 212 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 TMEM120BA0PK00 339 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 H3BMM5 538 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 ZNF862O60290 1169 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 USP2O75604 605 aaPredicted RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 OR6A2O95222 327 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 FAM228BP0C875 321 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 DGKAP23743 735 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 TOB1P50616 345 aaPredicted RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 TEAD4Q15561 434 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 CRY1Q16526 586 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 DDR2Q16832 855 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 CCDC142Q17RM4 750 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 TMEM119Q4V9L6 283 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 GRTP1Q5TC63 336 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 SDHAF4Q5VUM1 108 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 RAD9BQ6WBX8 426 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 C16orf62Q7Z3J2 963 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 KCNMB4Q86W47 210 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 SIX5Q8N196 739 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 FBXO39Q8N4B4 442 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 TC2NQ8N9U0 490 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 QRFPRQ96P65 431 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 ACO2Q99798 780 aaKnown RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 SH3GL1Q99961 368 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 THTPAQ9BU02 230 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 IRX2Q9BZI1 471 aaPredicted RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 PHACTR1Q9C0D0 580 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 ZYG11BQ9C0D3 744 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 CATSPERZQ9NTU4 200 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 KRT33AO76009 404 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 NFATC1O95644 943 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 KELP23276 732 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 RPA3P35244 121 aaPredicted RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 ERFP50548 548 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 RAD23BP54727 409 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 GCNT1Q02742 428 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 RUNX1T1Q06455 604 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 TBL3Q12788 808 aaKnown RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 ZNHIT3Q15649 155 aaPredicted RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 TDRD5Q8NAT2 981 aaKnown RBP7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 OR2W6PQ8NHA6 318 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 CLIP3Q96DZ5 547 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 PRRG3Q9BZD7 231 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 DPY30Q9C005 99 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 WHRNQ9P202 907 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 STARD13Q9Y3M8 1113 aa7.06□□□□□ -1.28
GAPVD1-202ENST00000297933 LOC100653049A0A140TA62 436 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 URADA6NGE7 173 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 ARHGEF9O43307 516 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 KRT34O76011 436 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 CATP04040 527 aaKnown RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 SLC12A3P55017 1021 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 PLOD1Q02809 727 aaPredicted RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 FPGSQ05932 587 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 SULT2A1Q06520 285 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 SMARCB1Q12824 385 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 ALG11Q2TAA5 492 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 PSRC1Q6PGN9 363 aaPredicted RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 MILR1Q7Z6M3 343 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 RSPH1Q8WYR4 309 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 MTMR9Q96QG7 549 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 MYCBPQ99417 103 aaPredicted RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 ADI1Q9BV57 179 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 KIAA1522Q9P206 1035 aaPredicted RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 GNPTGQ9UJJ9 305 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 KIAA1210Q9ULL0 1709 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 WDR27A2RRH5 827 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 E9PBE3 544 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 PRR23D1E9PI22 279 aaPredicted RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 NR5A2O00482 541 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 DUSP11O75319 330 aaKnown RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 ZNF682O95780 498 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 TRUB2O95900 331 aaKnown RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 GJB1P08034 283 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 PRR23D2P0DMB1 279 aaPredicted RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 CD44P16070 742 aaKnown RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 PGAM1P18669 254 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 CXCR2P25025 360 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 NTSP30990 170 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 SERPINB5P36952 375 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 HPCAL1P37235 193 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 MDH1P40925 334 aaKnown RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 GPR15P49685 360 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 NUDT2P50583 147 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 ANGPT1Q15389 498 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 BTNL9Q6UXG8 535 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 MSL3Q8N5Y2 521 aaKnown RBP7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 SCAIQ8N9R8 606 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 OR10G6Q8NH81 332 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 VAT1Q99536 393 aa7.05□□□□□ -1.28
GAPVD1-202ENST00000297933 TCF25Q9BQ70 676 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms