RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 PGAP3Q96FM1 320 aaPredicted RBP18.41■□□□□ 0.54
SEC22C-202ENST00000273156 DCLK3Q9C098 648 aa18.41■□□□□ 0.54
SEC22C-202ENST00000273156 RAB17Q9H0T7 212 aa18.41■□□□□ 0.54
SEC22C-202ENST00000273156 ARFGAP3Q9NP61 516 aa18.41■□□□□ 0.54
SEC22C-202ENST00000273156 GDF3Q9NR23 364 aa18.41■□□□□ 0.54
SEC22C-202ENST00000273156 MYO15AQ9UKN7 3530 aa18.41■□□□□ 0.54
SEC22C-202ENST00000273156 SCML2Q9UQR0 700 aa18.41■□□□□ 0.54
SEC22C-202ENST00000273156 VPS13AQ96RL7 3174 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 ZNF840PA6NDX5 716 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 TTI1O43156 1089 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 YWHAQP27348 245 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 SOX9P48436 509 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 IFNAR2P48551 515 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 ARSEP51690 589 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 GRSF1Q12849 480 aaKnown RBP eCLIP18.4■□□□□ 0.54
SEC22C-202ENST00000273156 NME3Q13232 169 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 TFDP2Q14188 446 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 SND1Q7KZF4 910 aaKnown RBP eCLIP18.4■□□□□ 0.54
SEC22C-202ENST00000273156 RFX6Q8HWS3 928 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 ARL14EPQ8N8R7 260 aaPredicted RBP18.4■□□□□ 0.54
SEC22C-202ENST00000273156 ZBTB44Q8NCP5 570 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 TTC8Q8TAM2 541 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 GRK7Q8WTQ7 553 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 CYP2S1Q96SQ9 504 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 ADAM33Q9BZ11 813 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 FRMD8P1Q9BZ68 369 aaPredicted RBP18.4■□□□□ 0.54
SEC22C-202ENST00000273156 EBF3Q9H4W6 596 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 TMEM51Q9NW97 253 aa18.4■□□□□ 0.54
SEC22C-202ENST00000273156 DUS2Q9NX74 493 aaKnown RBP18.4■□□□□ 0.54
SEC22C-202ENST00000273156 ZNF487B1APH4 448 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 CST8O60676 142 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 CD48P09326 243 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 TNFRSF8P28908 595 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 GBP1P32455 592 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 ATXN1P54253 815 aaKnown RBP18.39■□□□□ 0.53
SEC22C-202ENST00000273156 AIF1P55008 147 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 USP46P62068 366 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 TAF10Q12962 218 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 USP4Q13107 963 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 SNX1Q13596 522 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 ZNF77Q15935 545 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 DPYSL2Q16555 572 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 ZC3H12AQ5D1E8 599 aaKnown RBP18.39■□□□□ 0.53
SEC22C-202ENST00000273156 TTC27Q6P3X3 843 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 TXNDC11Q6PKC3 985 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 BBS12Q6ZW61 710 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 FAM131BQ86XD5 332 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 ATL2Q8NHH9 583 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 SH3RF2Q8TEC5 729 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 EDEM1Q92611 657 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 HINFPQ9BQA5 517 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 FAM204AQ9H8W3 233 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 PCDH18Q9HCL0 1135 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 IL37Q9NZH6 218 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 AP4E1Q9UPM8 1137 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 FAM186AA6NE01 2351 aa18.39■□□□□ 0.53
SEC22C-202ENST00000273156 CACNA1IQ9P0X4 2223 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 SYNJ2BP-COX16A0A087WUM0 186 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 C2orf78A6NCI8 922 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 PAPSS2O95340 614 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 ECEL1O95672 775 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 PITX1P78337 314 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 SLC7A9P82251 487 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 LMNB2Q03252 620 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 CCINQ13939 588 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 DPYSL3Q14195 570 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 PON2Q15165 354 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 ARL13BQ3SXY8 428 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 OTUD1Q5VV17 481 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 DDX42Q86XP3 938 aaKnown RBP eCLIP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 JAMLQ86YT9 394 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 FAM71BQ8TC56 605 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 ATG4AQ8WYN0 398 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 SLCO2A1Q92959 643 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 SLC22A12Q96S37 553 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 ZNF670Q9BS34 389 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 DHX35Q9H5Z1 703 aaKnown RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 HPS4Q9NQG7 708 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 GPATCH2LQ9NWQ4 482 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 DDIT4Q9NX09 232 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 COX16Q9P0S2 106 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 FZD10Q9ULW2 581 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 NUP210Q8TEM1 1887 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 MIA3Q5JRA6 1907 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 TRDMT1O14717 391 aaKnown RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 SLC9A3R1O14745 358 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 ATG13O75143 517 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 PTGIRP43119 386 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 KCNJ1P48048 391 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 ADCY2Q08462 1091 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 CUL1Q13616 776 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 DRICH1Q6PGQ1 229 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 SYDE1Q6ZW31 735 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 CCDC185Q8N715 623 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 EIF1ADQ8N9N8 165 aaKnown RBP18.38■□□□□ 0.53
SEC22C-202ENST00000273156 RNF139Q8WU17 664 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 FBXO32Q969P5 355 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 NTAN1Q96AB6 310 aa18.38■□□□□ 0.53
SEC22C-202ENST00000273156 RNF157Q96PX1 679 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms