RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 C16orf96A6NNT2 1141 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 LCP1P13796 627 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 ARF4P18085 180 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 ACADSBP45954 432 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 GLRA4Q5JXX5 417 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TLDC1Q6P9B6 456 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 HHIPL1Q96JK4 782 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 IL1RL2Q9HB29 575 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 SEPT3Q9UH03 358 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 MYRFQ9Y2G1 1151 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TCRBV9S1A1TA0A576 114 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TRPC5OSA6NMA1 111 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 MTA2O94776 668 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 STBD1O95210 358 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 HMGCRP04035 888 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TSHRP16473 764 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 FDFT1P37268 417 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 RAP1GAPP47736 663 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 NR1H2P55055 460 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 MRPS6P82932 125 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 KCTD21Q4G0X4 260 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 ARMC3Q5W041 872 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 PLEKHA7Q6IQ23 1121 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 C17orf99Q6UX52 265 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 CPNE8Q86YQ8 564 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 NUP93Q8N1F7 819 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 SGF29Q96ES7 293 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 PACSIN3Q9UKS6 424 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 hCG_1818297A0A087WSY0 165 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 C15orf38-AP3S2A0A0A6YYH1 394 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TGDSO95455 350 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 MYL4P12829 197 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 SOX11P35716 441 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 SERPINB10P48595 397 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 BFSP2Q13515 415 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 POLNQ7Z5Q5 900 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 ARPINQ7Z6K5 226 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 KIAA2013Q8IYS2 634 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 CLEC4FQ8N1N0 589 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 EFCAB3Q8N7B9 438 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TFB1MQ8WVM0 346 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TRIM62Q9BVG3 475 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 SEZ6LQ9BYH1 1024 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 GPAMQ9HCL2 828 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 SNTG2Q9NY99 539 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 BARX2Q9UMQ3 279 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 ZMPSTE24O75844 475 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 LINGO3P0C6S8 592 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 VCLP18206 1134 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 KDELR1P24390 212 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 HMOX2P30519 316 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 XIAPP98170 497 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TSPY1Q01534 308 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 HELQQ8TDG4 1101 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 TMEM176AQ96HP8 235 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 S100A14Q9HCY8 104 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 CHST12Q9NRB3 414 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 LNPEPQ9UIQ6 1025 aa11.79□□□□□ -0.52
CLSTN3-201ENST00000266546 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 SH3BP5O60239 455 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 F2P00734 622 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 TGM2P21980 687 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 PCSK1P29120 753 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 CDH8P55286 799 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 PKNOX1P55347 436 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 NOMO3P69849 1222 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 PTPN11Q06124 597 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 PDK1Q15118 436 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 NAT14Q8WUY8 206 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 RXFP2Q8WXD0 754 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 NCLNQ969V3 563 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 ATAD5Q96QE3 1844 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 FKTNO75072 461 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 H2AFYO75367 372 aaKnown RBP11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 AMPD1P23109 780 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 MGAT5Q09328 741 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 MORN1Q5T089 497 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 GLB1LQ6UWU2 654 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 ARCQ7LC44 396 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 TTC7BQ86TV6 843 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 KIAA0319LQ8IZA0 1049 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 OR5B17Q8NGF7 314 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 OR6P1Q8NGX9 317 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 BLOC1S6Q9UL45 172 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 LOXHD1Q8IVV2 1947 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 PEX1O43933 1283 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 TRIM13O60858 407 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 MIPP30301 263 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 TNFSF9P41273 254 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 GLRBP48167 497 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 ATP1A4Q13733 1029 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 NRF1Q16656 503 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 CNPY1Q3B7I2 92 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 GALNTL6Q49A17 601 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 SPDYAQ5MJ70 313 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 STRA8Q7Z7C7 330 aa11.78□□□□□ -0.52
CLSTN3-201ENST00000266546 CROCCP3Q8IVE0 287 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms