RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 LILRA2Q8N149 483 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 VPS50Q96JG6 964 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 PCDH18Q9HCL0 1135 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 TMEM247A6NEH6 219 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 CFAP99D6REC4 459 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 H6PDO95479 791 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 ESRRBO95718 433 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 ALDH4A1P30038 563 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 SCUBE3Q8IX30 993 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 UBR7Q8N806 425 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 MZB1Q8WU39 189 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 CAPSLQ8WWF8 208 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 NCSTNQ92542 709 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 ZNF778Q96MU6 729 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 BEGAINQ9BUH8 593 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 COPG2Q9UBF2 871 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 ST14Q9Y5Y6 855 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 GMEB1Q9Y692 573 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 ZNF541Q9H0D2 1346 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 BCORQ6W2J9 1755 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 RGSL1A5PLK6 1076 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 E2F6O75461 281 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 LTFP02788 710 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 GRK2P25098 689 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 CRHR1P34998 444 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 TCF7P36402 384 aaPredicted RBP16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 GABRB2P47870 512 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 PTP4A2Q12974 167 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 DUOXA2Q1HG44 320 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 PGS1Q32NB8 556 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 FGD3Q5JSP0 725 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 CBR4Q8N4T8 237 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 MAGEE2Q8TD90 523 aaPredicted RBP16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 USP33Q8TEY7 942 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 AGO4Q9HCK5 861 aaKnown RBP16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 RAB26Q9ULW5 256 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 HES2Q9Y543 173 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 MYH9P35579 1960 aaKnown RBP16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 SMCHD1A6NHR9 2005 aa16.27■□□□□ 0.19
PRPF40B-201ENST00000261897 NUP98P52948 1817 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 BBOX1O75936 387 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 CCNE2O96020 404 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 OCA2Q04671 838 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 BAATQ14032 418 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 CYP2A13Q16696 494 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 ZNF618Q5T7W0 954 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 ERI1Q8IV48 349 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 CENPSQ8N2Z9 138 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 MCPH1Q8NEM0 835 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 LPGAT1Q92604 370 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 EBNA1BP2Q99848 306 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 POPDC2Q9HBU9 364 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 TUBGCP4Q9UGJ1 667 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 DCDC2Q9UHG0 476 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 VARSP26640 1264 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 ATXN1P54253 815 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 AHI1Q8N157 1196 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 PHF21BQ96EK2 531 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 VCPIP1Q96JH7 1222 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 MFSD14AQ96MC6 490 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 PTGES3LE9PB15 166 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 PLOD2O00469 737 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 CBFA2T3O75081 653 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 BCL10O95999 233 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 FGF3P11487 239 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 LCP1P13796 627 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 IL1R1P14778 569 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 HOXD12P35452 270 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 ITGA7Q13683 1181 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 RGS21Q2M5E4 152 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 KBTBD6Q86V97 674 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 PLD6Q8N2A8 252 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 MARVELD2Q8N4S9 558 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 ELMO1Q92556 727 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 SLC29A1Q99808 456 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 NAA50Q9GZZ1 169 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 MARCH7Q9H992 704 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 CLK4Q9HAZ1 481 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 COQ4Q9Y3A0 265 aa16.26■□□□□ 0.19
PRPF40B-201ENST00000261897 PDE4DIPQ5VU43 2346 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 TRIM13O60858 407 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 GNAO1P09471 354 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 ZNF23P17027 643 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 HSPA13P48723 471 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 EMC2Q15006 297 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 FAM131BQ86XD5 332 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 PBXIP1Q96AQ6 731 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 ANKRD36BP1Q96IX9 119 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 IARS2Q9NSE4 1012 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 FAM198AQ9UFP1 575 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 CEPT1Q9Y6K0 416 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 WDR46O15213 610 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 PAPSS1O43252 624 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 GSTT2P0CG29 244 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 GSTT2BP0CG30 244 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 GPD1P21695 349 aa16.25■□□□□ 0.19
PRPF40B-201ENST00000261897 PSME3P61289 254 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms