RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 CFAP52Q8N1V2 620 aa21.31■■□□□ 1
RTCA-201ENST00000260563 FAM71BQ8TC56 605 aa21.31■■□□□ 1
RTCA-201ENST00000260563 IGSF8Q969P0 613 aa21.31■■□□□ 1
RTCA-201ENST00000260563 MAGEB5Q9BZ81 275 aa21.31■■□□□ 1
RTCA-201ENST00000260563 STIM2Q9P246 746 aa21.31■■□□□ 1
RTCA-201ENST00000260563 PGRMC1O00264 195 aaKnown RBP21.3■■□□□ 1
RTCA-201ENST00000260563 CREB3O43889 395 aa21.3■■□□□ 1
RTCA-201ENST00000260563 CACNG3O60359 315 aa21.3■■□□□ 1
RTCA-201ENST00000260563 LRIG2O94898 1065 aa21.3■■□□□ 1
RTCA-201ENST00000260563 FGGP02679 453 aa21.3■■□□□ 1
RTCA-201ENST00000260563 L1CAMP32004 1257 aa21.3■■□□□ 1
RTCA-201ENST00000260563 PTPN7P35236 360 aa21.3■■□□□ 1
RTCA-201ENST00000260563 CDKN2BP42772 138 aa21.3■■□□□ 1
RTCA-201ENST00000260563 DPYSL3Q14195 570 aa21.3■■□□□ 1
RTCA-201ENST00000260563 GAB4Q2WGN9 574 aa21.3■■□□□ 1
RTCA-201ENST00000260563 C5orf22Q49AR2 442 aa21.3■■□□□ 1
RTCA-201ENST00000260563 IER5LQ5T953 404 aa21.3■■□□□ 1
RTCA-201ENST00000260563 MANEALQ5VSG8 457 aa21.3■■□□□ 1
RTCA-201ENST00000260563 C1orf228Q6PIY5 440 aa21.3■■□□□ 1
RTCA-201ENST00000260563 ANKS1BQ7Z6G8 1248 aa21.3■■□□□ 1
RTCA-201ENST00000260563 ZNF683Q8IZ20 524 aa21.3■■□□□ 1
RTCA-201ENST00000260563 NAT16Q8N8M0 369 aa21.3■■□□□ 1
RTCA-201ENST00000260563 TBC1D31Q96DN5 1066 aa21.3■■□□□ 1
RTCA-201ENST00000260563 P2RY11Q96G91 374 aa21.3■■□□□ 1
RTCA-201ENST00000260563 KCTD15Q96SI1 283 aaPredicted RBP21.3■■□□□ 1
RTCA-201ENST00000260563 CALN1Q9BXU9 219 aa21.3■■□□□ 1
RTCA-201ENST00000260563 PCDH18Q9HCL0 1135 aa21.3■■□□□ 1
RTCA-201ENST00000260563 SMARCAL1Q9NZC9 954 aa21.3■■□□□ 1
RTCA-201ENST00000260563 IGLV3-10A0A075B6K4 115 aa21.29■■□□□ 1
RTCA-201ENST00000260563 A0A1B0GVM2 712 aa21.29■■□□□ 1
RTCA-201ENST00000260563 TCAF2A6NFQ2 919 aa21.29■■□□□ 1
RTCA-201ENST00000260563 FAM72CH0Y354 149 aa21.29■■□□□ 1
RTCA-201ENST00000260563 PDE2AO00408 941 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 EIF2DP41214 584 aaKnown RBP21.29■■□□□ 1
RTCA-201ENST00000260563 PRKCQQ04759 706 aa21.29■■□□□ 1
RTCA-201ENST00000260563 PPP2R5EQ16537 467 aa21.29■■□□□ 1
RTCA-201ENST00000260563 TAZQ16635 292 aa21.29■■□□□ 1
RTCA-201ENST00000260563 LONRF2Q1L5Z9 754 aa21.29■■□□□ 1
RTCA-201ENST00000260563 TFDP3Q5H9I0 405 aa21.29■■□□□ 1
RTCA-201ENST00000260563 PPP6R3Q5H9R7 873 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 FAM72AQ5TYM5 149 aa21.29■■□□□ 1
RTCA-201ENST00000260563 FAM72DQ6L9T8 149 aa21.29■■□□□ 1
RTCA-201ENST00000260563 RWDD4Q6NW29 188 aaKnown RBP21.29■■□□□ 1
RTCA-201ENST00000260563 C12orf40Q86WS4 652 aa21.29■■□□□ 1
RTCA-201ENST00000260563 FAM72BQ86X60 149 aa21.29■■□□□ 1
RTCA-201ENST00000260563 CIR1Q86X95 450 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 VSIG1Q86XK7 387 aa21.29■■□□□ 1
RTCA-201ENST00000260563 SLC13A5Q86YT5 568 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 MFN1Q8IWA4 741 aa21.29■■□□□ 1
RTCA-201ENST00000260563 CCDC117Q8IWD4 279 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 EXOC4Q96A65 974 aa21.29■■□□□ 1
RTCA-201ENST00000260563 CHFRQ96EP1 664 aa21.29■■□□□ 1
RTCA-201ENST00000260563 NAP1L3Q99457 506 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 OSBPL8Q9BZF1 889 aa21.29■■□□□ 1
RTCA-201ENST00000260563 ZYG11BQ9C0D3 744 aa21.29■■□□□ 1
RTCA-201ENST00000260563 PPARGC1AQ9UBK2 798 aaKnown RBP21.29■■□□□ 1
RTCA-201ENST00000260563 TRIOO75962 3097 aa21.29■■□□□ 1
RTCA-201ENST00000260563 hCG_1818297A0A087WSY0 165 aa21.29■■□□□ 1
RTCA-201ENST00000260563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 EEF2KO00418 725 aaKnown RBP21.29■■□□□ 1
RTCA-201ENST00000260563 LUC7L3O95232 432 aaKnown RBP21.29■■□□□ 1
RTCA-201ENST00000260563 HTR7P34969 479 aa21.29■■□□□ 1
RTCA-201ENST00000260563 IRAK1P51617 712 aa21.29■■□□□ 1
RTCA-201ENST00000260563 ZNF135P52742 658 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 TPI1P60174 286 aa21.29■■□□□ 1
RTCA-201ENST00000260563 SEMA3BQ13214 749 aa21.29■■□□□ 1
RTCA-201ENST00000260563 CDH18Q13634 790 aa21.29■■□□□ 1
RTCA-201ENST00000260563 LLGL1Q15334 1064 aa21.29■■□□□ 1
RTCA-201ENST00000260563 CHST9Q7L1S5 443 aa21.29■■□□□ 1
RTCA-201ENST00000260563 ETFBKMTQ8IXQ9 262 aa21.29■■□□□ 1
RTCA-201ENST00000260563 CARNMT1Q8N4J0 409 aa21.29■■□□□ 1
RTCA-201ENST00000260563 CEP112Q8N8E3 955 aa21.29■■□□□ 1
RTCA-201ENST00000260563 ZNF557Q8N988 423 aaPredicted RBP21.29■■□□□ 1
RTCA-201ENST00000260563 ZNF670Q9BS34 389 aa21.29■■□□□ 1
RTCA-201ENST00000260563 DNAJC17Q9NVM6 304 aaKnown RBP21.29■■□□□ 1
RTCA-201ENST00000260563 DRGXA6NNA5 263 aa21.28■■□□□ 1
RTCA-201ENST00000260563 TULP3O75386 442 aa21.28■■□□□ 1
RTCA-201ENST00000260563 KRT10P13645 584 aa21.28■■□□□ 1
RTCA-201ENST00000260563 ALADP13716 330 aa21.28■■□□□ 1
RTCA-201ENST00000260563 OPRD1P41143 372 aa21.28■■□□□ 1
RTCA-201ENST00000260563 CDH4P55283 916 aa21.28■■□□□ 1
RTCA-201ENST00000260563 SIGLEC14Q08ET2 396 aa21.28■■□□□ 1
RTCA-201ENST00000260563 RNF43Q68DV7 783 aa21.28■■□□□ 1
RTCA-201ENST00000260563 SIX5Q8N196 739 aa21.28■■□□□ 1
RTCA-201ENST00000260563 TSC1Q92574 1164 aa21.28■■□□□ 1
RTCA-201ENST00000260563 EDAQ92838 391 aa21.28■■□□□ 1
RTCA-201ENST00000260563 SHDQ96IW2 340 aa21.28■■□□□ 1
RTCA-201ENST00000260563 CARD6Q9BX69 1037 aa21.28■■□□□ 1
RTCA-201ENST00000260563 HEMGNQ9BXL5 484 aa21.28■■□□□ 1
RTCA-201ENST00000260563 MPP6Q9NZW5 540 aa21.28■■□□□ 1
RTCA-201ENST00000260563 NEU3Q9UQ49 428 aa21.28■■□□□ 1
RTCA-201ENST00000260563 CHD5Q8TDI0 1954 aa21.28■■□□□ 1
RTCA-201ENST00000260563 KRBA1A5PL33 1030 aa21.27■■□□□ 1
RTCA-201ENST00000260563 ZNF487B1APH4 448 aa21.27■■□□□ 1
RTCA-201ENST00000260563 H0Y626 953 aa21.27■■□□□ 1
RTCA-201ENST00000260563 MAN2B1O00754 1011 aa21.27■■□□□ 1
RTCA-201ENST00000260563 CLDN11O75508 207 aa21.27■■□□□ 1
RTCA-201ENST00000260563 CNTN5O94779 1100 aa21.27■■□□□ 1
RTCA-201ENST00000260563 IL4RP24394 825 aa21.27■■□□□ 1
RTCA-201ENST00000260563 EPHB2P29323 1055 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms