RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Ambra1A2AH22 1300 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Vmn2r39L7N2E5 861 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Phka1P18826 1241 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 PgfP49764 158 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Srbd1Q497V5 1015 aaKnown RBP16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Proser1Q5PRE5 913 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Epha10Q8BYG9 1007 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Smap1Q91VZ6 440 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Nmd3Q99L48 503 aaKnown RBP16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Ddx21Q9JIK5 851 aaKnown RBP16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Wdr12Q9JJA4 423 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Arih2Q9Z1K6 492 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 4921501E09RikA0A0R4J054 908 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Tmigd3G3X8R9 209 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Trdmt1O55055 415 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 HpcaP84075 193 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 DselQ0VBN2 1207 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 9930111J21Rik1Q5SVP0 844 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Txndc5Q91W90 417 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Vangl2Q91ZD4 521 aa16.1■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Rnf19bA2A7Q9 732 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Magea10A2AMW4 325 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Gm5415E9PXF3 478 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Elk3P41971 409 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Suz12Q80U70 741 aaKnown RBP16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Fbxo9Q8BK06 437 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Atg14Q8CDJ3 492 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 PargO88622 969 aaKnown RBP16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 AaasP58742 546 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Serac1Q3U213 654 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Ankrd27Q3UMR0 1048 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Zswim9Q6DI92 447 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Hsdl1Q8BTX9 330 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 HpgdQ8VCC1 269 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Cyp4a29A0A087WPC3 509 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 1700031M16RikA0A087WSH0 82 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Gm6408J3QNG1 320 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Pik3r2O08908 722 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Vti1bO88384 232 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Irak4Q8R4K2 459 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Uroc1Q8VC12 676 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 HaspinQ9Z0R0 754 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Gm28897A0A087WP44 222 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Csf1rP09581 977 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 TpbpaP13438 124 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Meis2P97367 477 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 P3h1Q3V1T4 739 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Ints6Q6PCM2 883 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Oscp1Q8BHW2 379 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Eme1Q8BJW7 570 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Tnfaip8Q921Z5 198 aa16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 DarsQ922B2 501 aaKnown RBP16.09■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Vmn2r72D3Z4N8 856 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Aknad1E9Q8N6 675 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Aqp1Q02013 269 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 A1cfQ5YD48 595 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Depdc7Q91WS7 511 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Tlr6Q9EPW9 795 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Igdcc4Q9EQS9 1252 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Ak1Q9R0Y5 194 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Serpina6Q06770 397 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 TdrpQ8C5P7 182 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Rab14Q91V41 215 aaKnown RBP16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Tomm70Q9CZW5 611 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 IkbkeQ9R0T8 717 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Smarcb1Q9Z0H3 385 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Dyrk1bQ9Z188 629 aa16.08■□□□□ 0.17
Clcn3-203ENSMUST00000093490 Myl4P09541 193 aaKnown RBP16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 DsppP97399 934 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Zfp560Q3URI6 754 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sike1Q9CPR7 207 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 4930519G04RikQ9CPT7 205 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 GarsQ9CZD3 729 aaKnown RBP16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm21083A0A0G2JFD5 256 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm7535F7CXE4 302 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Bmpr2O35607 1038 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Nckap1P28660 1128 aaKnown RBP16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Pabpc1P29341 636 aaKnown RBP16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Dennd1bQ3U1T9 766 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Lag3Q61790 521 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Guca1bQ8VBV8 201 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Aim2Q91VJ1 354 aaKnown RBP16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Chchd6Q91VN4 273 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 PigxQ99LV7 254 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 S100pbpQ9D5K4 396 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 CfhP06909 1234 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Krt42Q6IFX2 452 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Dsg1bQ7TSF1 1060 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ccdc59Q8R2N0 240 aaKnown RBP16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ift46Q9DB07 301 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Sfmbt1Q9JMD1 863 aa16.08■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Gm3526E9PZM0 191 aa16.07■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Btg4O70552 250 aa16.07■□□□□ 0.16
Clcn3-203ENSMUST00000093490 GpamQ61586 827 aa16.07■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Tex13c3Q810P0 219 aa16.07■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Mta3Q924K8 591 aa16.07■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Coro1cQ9WUM4 474 aa16.07■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Ubr1O70481 1757 aa16.07■□□□□ 0.16
Clcn3-203ENSMUST00000093490 PotegA5H0M4 473 aa16.07■□□□□ 0.16
Clcn3-203ENSMUST00000093490 Armt1A6H630 439 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 231.8 ms