RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 TLR8Q9NR97 1041 aaKnown RBP13.46□□□□□ -0.26
SYNGAP1-208ENST00000629380 HSD17B3P37058 310 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 LHX1P48742 406 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 CASP1P29466 404 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 RRN3Q9NYV6 651 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 TEX46H3BTG2 121 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 TDP2O95551 362 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 AQP5P55064 265 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 RPL19P84098 196 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 PPIDQ08752 370 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 MED24O75448 989 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 CYP7B1O75881 506 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 FGFR2P21802 821 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 SCTRP47872 440 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 ATP1A4Q13733 1029 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 INTS11Q5TA45 600 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 EHD3Q9NZN3 535 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 IRGMA1A4Y4 181 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 FAM196BA6NMK8 535 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 UMPSP11172 480 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 NMT1P30419 496 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 POLR2LP62875 67 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 TBCELQ5QJ74 424 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 KBTBD8Q8NFY9 601 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 OR6Y1Q8NGX8 325 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 PPP1R16AQ96I34 528 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 CHST12Q9NRB3 414 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 SLC24A2Q9UI40 661 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 ING4Q9UNL4 249 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 PPIEQ9UNP9 301 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 A0A087WXM4 84 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 ACSL4O60488 711 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 UPP2O95045 317 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 HOXB8P17481 243 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 VBP1P61758 197 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 ITGADQ13349 1161 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 CBFBQ13951 182 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 TRIM39Q9HCM9 518 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 GTF3C4Q9UKN8 822 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 UBQLN1Q9UMX0 589 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF232Q9UNY5 417 aa13.45□□□□□ -0.26
SYNGAP1-208ENST00000629380 LCA5LO95447 670 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CCDC166P0CW27 439 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 TCF4P15884 667 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 TTKP33981 857 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 SLC13A5Q86YT5 568 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 DLG3Q92796 817 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 REEP1Q9H902 201 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CCDC162PA2VCL2 907 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 C2CD2LO14523 706 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CPSF4O95639 269 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 LDOC1O95751 146 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 GNRH1P01148 92 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 TLX1P31314 330 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CAPGP40121 348 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 HALP42357 657 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CXXC5Q7LFL8 322 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 OR56A4Q8NGH8 313 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 A0A087X1B8 175 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 ALOX12P18054 663 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 AGKQ53H12 422 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 EFCAB12Q6NXP0 572 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 SOCS4Q8WXH5 440 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 SHOC2Q9UQ13 582 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 ACOT9Q9Y305 439 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 ELAVL2Q12926 359 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 METTL16Q86W50 562 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 GPC2Q8N158 579 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 RGS14O43566 566 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 PRKAR1AP10644 381 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 PTPAQ15257 358 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CYB5D1Q6P9G0 228 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 A0A0A6YYK5 440 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 KRT33AO76009 404 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 RECQL5O94762 991 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CPA2P48052 419 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 RAB27AP51159 221 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 USP50Q70EL3 339 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 TMEM120AQ9BXJ8 343 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 HEY2Q9UBP5 337 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 PCDH8O95206 1070 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CDC42P60953 191 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 LPIN1Q14693 890 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 EPHA10Q5JZY3 1008 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 ULK3Q6PHR2 472 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 EEF1AKMT1Q8WVE0 214 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 NT5MQ9NPB1 228 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 GSAPA4D1B5 854 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 F8VZ95 297 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 PTPN1P18031 435 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 C21orf59P57076 290 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 NR1I3Q14994 352 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 CYP2A13Q16696 494 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 TMEM138Q9NPI0 162 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms