RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CDKL2Q92772 493 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 FERMT1Q9BQL6 677 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 KATNAL1Q9BW62 490 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 XPNPEP3Q9NQH7 507 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 EIF2B3Q9NR50 452 aaKnown RBP12.29□□□□□ -0.44
TP53-227ENST00000622645 DDIT4Q9NX09 232 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 MAGED2Q9UNF1 606 aaPredicted RBP12.29□□□□□ -0.44
TP53-227ENST00000622645 RPS6KL1Q9Y6S9 549 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 E2F8A0AVK6 867 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 WFS1O76024 890 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 THP07101 528 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 GNAT1P11488 350 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 PTPN3P26045 913 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 TPI1P60174 286 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 PDE1CQ14123 709 aaPredicted RBP12.29□□□□□ -0.44
TP53-227ENST00000622645 PAN2Q504Q3 1202 aaKnown RBP12.29□□□□□ -0.44
TP53-227ENST00000622645 PPM1JQ5JR12 505 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 TLDC1Q6P9B6 456 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 DSTYKQ6XUX3 929 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 TRIM42Q8IWZ5 723 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 GORASP1Q9BQQ3 440 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 TLE6Q9H808 572 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 EMCNQ9ULC0 261 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 SCN4AP35499 1836 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 H0Y3Z8 333 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 ITGA2BP08514 1039 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 HOXC8P31273 242 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 CPA2P48052 419 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 SCNN1GP51170 649 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 AQP5P55064 265 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 RPL10AP62906 217 aaKnown RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 MRPS6P82932 125 aaKnown RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 PDE1BQ01064 536 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 SEMA3BQ13214 749 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 TAF1CQ15572 869 aaPredicted RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 FASTKD1Q53R41 847 aaKnown RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 N4BP2L1Q5TBK1 243 aaPredicted RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 TAF2Q6P1X5 1199 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 RINLQ6ZS11 566 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 FCRL3Q96P31 734 aaPredicted RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 NUDCD1Q96RS6 583 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 RNPEPL1Q9HAU8 725 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 KCNK4Q9NYG8 393 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 ZFATQ9P243 1243 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 IGSF9Q9P2J2 1179 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 FBXW11Q9UKB1 542 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 ARL5CA6NH57 179 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 GYG2O15488 501 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 GSC2O15499 205 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 ZBTB24O43167 697 aaPredicted RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 SNNO75324 88 aaPredicted RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 ESRRAP11474 423 aaPredicted RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 KCNA4P22459 653 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 CNTFP26441 200 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 LHX1P48742 406 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 STX3Q13277 289 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 CXCL17Q6UXB2 119 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 CRLF3Q8IUI8 442 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 ATXN7L3BQ96GX2 97 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 SLC9A7Q96T83 725 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 COLEC11Q9BWP8 271 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 PRDM16Q9HAZ2 1276 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 CNGB3Q9NQW8 809 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 SLC38A7Q9NVC3 462 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 TAS2R1Q9NYW7 299 aa12.28□□□□□ -0.44
TP53-227ENST00000622645 PPARGC1AQ9UBK2 798 aaKnown RBP12.28□□□□□ -0.44
TP53-227ENST00000622645 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.44
TP53-227ENST00000622645 M0QZ92 97 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 ITM2AO43736 263 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 HNRNPCL1O60812 293 aaKnown RBP12.27□□□□□ -0.44
TP53-227ENST00000622645 LYPLA1O75608 230 aaPredicted RBP12.27□□□□□ -0.44
TP53-227ENST00000622645 FBXO21O94952 628 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 LTFP02788 710 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 POLBP06746 335 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 CALB2P22676 271 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 IRF5Q13568 498 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 TIGD5Q53EQ6 642 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 GNASQ5JWF2 1037 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 CST9Q5W186 159 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 RASSF3Q86WH2 238 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 TREML1Q86YW5 311 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 CCNJLQ8IV13 435 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.27□□□□□ -0.44
TP53-227ENST00000622645 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 NTAN1Q96AB6 310 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 APOL2Q9BQE5 337 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 EBF4Q9BQW3 602 aa12.27□□□□□ -0.44
TP53-227ENST00000622645 HHLA1C9JL84 531 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 BIRC5O15392 142 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 CHRNA1P02708 482 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 HUNKP57058 714 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 KRT72Q14CN4 511 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 RAB41Q5JT25 222 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 KYAT3Q6YP21 454 aaKnown RBP12.27□□□□□ -0.45
TP53-227ENST00000622645 AGMOQ6ZNB7 445 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 C4orf50Q6ZRC1 276 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 BHLHA9Q7RTU4 235 aa12.27□□□□□ -0.45
TP53-227ENST00000622645 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.27□□□□□ -0.45
TP53-227ENST00000622645 DNAAF3Q8N9W5 541 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms