RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836		B8ZZF3	427 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MAP2K7	O14733	419 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PPEF2	O14830	753 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CRYZL1	O95825	349 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ALDH1A1	P00352	501 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ASL	P04424	464 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RPS17	P08708	135 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CPA3	P15088	417 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ABCB4	P21439	1286 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PSMA2	P25787	234 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PCGF2	P35227	344 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	EIF1AX	P47813	144 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CLCNKA	P51800	687 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PPP5C	P53041	499 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PRRX1	P54821	245 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SRP54	P61011	504 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ERVK-21	P61565	698 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TRA2B	P62995	288 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	LACTB	P83111	547 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ARF5	P84085	180 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RAPSN	Q13702	412 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GRIK4	Q16099	956 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SGSM1	Q2NKQ1	1148 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PLA2G4E	Q3MJ16	856 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	FNDC3B	Q53EP0	1204 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF852	Q6ZMS4	543 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TPGS1	Q6ZTW0	290 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	BTLA	Q7Z6A9	289 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MAP7D3	Q8IWC1	876 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DNAJC10	Q8IXB1	793 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TCP11L2	Q8N4U5	519 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PLD5	Q8N7P1	536 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	EHBP1	Q8NDI1	1231 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	URGCP	Q8TCY9	931 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	WDR60	Q8WVS4	1066 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF764	Q96H86	408 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	KCTD15	Q96SI1	283 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CCDC77	Q9BR77	488 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	NT5C1A	Q9BXI3	368 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	C1QTNF1	Q9BXJ1	281 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MRPL1	Q9BYD6	325 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	EPS8L2	Q9H6S3	715 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CYP26B1	Q9NR63	512 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	LRRC4B	Q9NT99	713 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SAMD15	Q9P1V8	674 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	AURKC	Q9UQB9	309 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836		A0A0U1RQK1	487 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF320	A2RRD8	509 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SLC9A3R1	O14745	358 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SHOX	O15266	292 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PROM1	O43490	865 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GJB3	O75712	270 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RASSF9	O75901	435 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MYO1D	O94832	1006 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	FARP2	O94887	1054 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	KRT3	P12035	628 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	HOXD8	P13378	290 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	EZR	P15311	586 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	BPI	P17213	487 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	NMT1	P30419	496 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RABIF	P47224	123 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GPM6B	Q13491	265 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RPS6KA2	Q15349	733 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	C8orf34	Q49A92	452 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GRAMD4	Q6IC98	578 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	FOXR2	Q6PJQ5	311 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF765	Q7L2R6	523 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TPRA1	Q86W33	373 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF227	Q86WZ6	799 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DPP10	Q8N608	796 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	FAM13C	Q8NE31	585 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	OR52M1	Q8NGK5	317 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF384	Q8TF68	577 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SCFD1	Q8WVM8	642 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TANK	Q92844	425 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RFK	Q969G6	155 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CHMP6	Q96FZ7	201 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TMEM206	Q9H813	350 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	MRPL44	Q9H9J2	332 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TMEM8A	Q9HCN3	771 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	NRIP3	Q9NQ35	241 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZDHHC18	Q9NUE0	388 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	HAUS2	Q9NVX0	235 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ACTR10	Q9NZ32	417 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	STX18	Q9P2W9	335 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SUCO	Q9UBS9	1254 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GGA1	Q9UJY5	639 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	USP16	Q9Y5T5	823 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TMEM210	A6NLX4	147 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GPR171	O14626	319 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ANGPT2	O15123	496 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TBX10	O75333	385 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	IPO13	O94829	963 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PTBP3	O95758	552 aa	Known RBP	4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GSTM1	P09488	218 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CPA1	P15085	419 aa		4.2	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ITGA2	P17301	1181 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms