RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SLC6A11P48066 632 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 ARSEP51690 589 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 TPI1P60174 286 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 ZNF569Q5MCW4 686 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 MPP7Q5T2T1 576 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 C12orf40Q86WS4 652 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 MAP7D3Q8IWC1 876 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 UBALD2Q8IYN6 164 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 CARNMT1Q8N4J0 409 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 XPO6Q96QU8 1125 aaKnown RBP16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 ZYG11BQ9C0D3 744 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 C8orf33Q9H7E9 229 aaPredicted RBP16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 DDX56Q9NY93 547 aaKnown RBP16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 CWC15Q9P013 229 aaKnown RBP16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 PPARGC1AQ9UBK2 798 aaKnown RBP16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 PCDHA3Q9Y5H8 950 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 PIAS3Q9Y6X2 628 aa16.1■□□□□ 0.17
PCDHGC3-204ENST00000617222 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 CCDC66A2RUB6 948 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 LRRD1A4D1F6 860 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 SPECC1L-ADORA2AF8WAN1 911 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 H3BRJ5 948 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 DAPK3O43293 454 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 LUC7L3O95232 432 aaKnown RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 RHOQP17081 205 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 GOT1P17174 413 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 KDELR1P24390 212 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 CTNNA1P35221 906 aaKnown RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 ARL4AP40617 200 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 DNA2P51530 1060 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 ZNF135P52742 658 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 CDH4P55283 916 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 AMPD2Q01433 879 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 MMRN1Q13201 1228 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 ZNF177Q13360 481 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 PDK2Q15119 407 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 ODF2Q5BJF6 829 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 TTC39BQ5VTQ0 682 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 NAIF1Q69YI7 327 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 RFX8Q6ZV50 586 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 FAM71BQ8TC56 605 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 RNF25Q96BH1 459 aaPredicted RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 CALN1Q9BXU9 219 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 DNAJC17Q9NVM6 304 aaKnown RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 FBXL21Q9UKT6 434 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 CA14Q9ULX7 337 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 ZKSCAN5Q9Y2L8 839 aa16.09■□□□□ 0.17
PCDHGC3-204ENST00000617222 A0A1B0GVM2 712 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 TCAF2A6NFQ2 919 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 MIF4GDA9UHW6 222 aaKnown RBP16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 H0Y626 953 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 TRIM24O15164 1050 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 DDX3YO15523 660 aaKnown RBP16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 CACNG3O60359 315 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 CLDN11O75508 207 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 ZRANB2O95218 330 aaKnown RBP eCLIP16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 AMPD1P23109 780 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 IL4RP24394 825 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 HOXC13P31276 330 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 CTHP32929 405 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 HTR7P34969 479 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 OPRD1P41143 372 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 HCAR3P49019 387 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 PEX5P50542 639 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 ZXDAP98168 799 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 DPYSL3Q14195 570 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 RPS6KA1Q15418 735 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 MEI1Q5TIA1 1274 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 CHST9Q7L1S5 443 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 TFAP2DQ7Z6R9 452 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 MFN1Q8IWA4 741 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 CCDC117Q8IWD4 279 aaPredicted RBP16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 ETFBKMTQ8IXQ9 262 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 KATNAL2Q8IYT4 538 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 RCOR2Q8IZ40 523 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 SLC35F6Q8N357 371 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 UBL4BQ8N7F7 174 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 WFDC5Q8TCV5 224 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 TSC1Q92574 1164 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 CHFRQ96EP1 664 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 HES6Q96HZ4 224 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 CSPG4P5Q96PW8 444 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 CATSPERBQ9H7T0 1116 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 WNT16Q9UBV4 365 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 FBXO10Q9UK96 956 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 NEU3Q9UQ49 428 aa16.08■□□□□ 0.16
PCDHGC3-204ENST00000617222 C3orf70A6NLC5 250 aaPredicted RBP16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 TULP3O75386 442 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 CISD3P0C7P0 127 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 GLULP15104 373 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 GALK1P51570 392 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 RWDD2BP57060 319 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 CDH18Q13634 790 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 MLF2Q15773 248 aaPredicted RBP16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 FSCBQ5H9T9 825 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 RNF43Q68DV7 783 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 ASTLQ6HA08 431 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms