RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, human

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YTHDF3-208	ENST00000615676	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FRMPD4	Q14CM0	1322 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	INO80	Q9ULG1	1556 aa	Predicted RBP	13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TRDMT1	O14717	391 aa	Known RBP	13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ZBTB14	O43829	449 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CYP7B1	O75881	506 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	HNRNPH1	P31943	449 aa	Known RBP	13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PSEN2	P49810	448 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ARMC12	Q5T9G4	340 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TYW3	Q6IPR3	259 aa	Known RBP	13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TMEM132C	Q8N3T6	1108 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	METTL6	Q8TCB7	284 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ACTRT2	Q8TDY3	377 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CENPT	Q96BT3	561 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TMEM39A	Q9NV64	488 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	RABGEF1	Q9UJ41	708 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CRYL1	Q9Y2S2	319 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	RIPK2	O43353	540 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SEC22B	O75396	215 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CABYR	O75952	493 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	IL5RA	Q01344	420 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	BOP1	Q14137	746 aa	Known RBP	13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	OASL	Q15646	514 aa	Known RBP	13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ZNF470	Q6ECI4	717 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	RIPOR1	Q6ZS17	1223 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FAM228A	Q86W67	206 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	DHFR2	Q86XF0	187 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TRPC4AP	Q8TEL6	797 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	USP7	Q93009	1102 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MAGED4	Q96JG8	741 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	BBS4	Q96RK4	519 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	APOL4	Q9BPW4	351 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	LACRT	Q9GZZ8	138 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MID1IP1	Q9NPA3	183 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FBXO10	Q9UK96	956 aa		13.92	□□□□□ -0.18
YTHDF3-208	ENST00000615676		A0A087X1B8	175 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CENPX	A8MT69	81 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	RGS14	O43566	566 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PAICS	P22234	425 aa	Known RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	HPCAL1	P37235	193 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	DEFB107A	Q8IZN7	70 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	DEFB106A	Q8N104	65 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CSGALNACT1	Q8TDX6	532 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PHF21B	Q96EK2	531 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PPP1R16A	Q96I34	528 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SERHL2	Q9H4I8	314 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SERHL	Q9NQF3	203 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TSC22D4	Q9Y3Q8	395 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TNPO3	Q9Y5L0	923 aa	Known RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CHD1	O14646	1710 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676		A0A096LPK6	155 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SMIM31	A0A1B0GVY4	71 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	WDR27	A2RRH5	827 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ATG7	O95352	703 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CLPTM1	O96005	669 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	GHR	P10912	638 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PAX3	P23760	479 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SHMT1	P34896	483 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FAM126B	Q8IXS8	530 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FIG4	Q92562	907 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ADI1	Q9BV57	179 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ABCC13	Q9NSE7	274 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	L1RE1	Q9UN81	338 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FAM205A	Q6ZU69	1335 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TECPR2	O15040	1411 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CCDC154	A6NI56	674 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SLC9A3R1	O14745	358 aa	Predicted RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FGF10	O15520	208 aa	Predicted RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SLITRK3	O94933	977 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ANXA6	P08133	673 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	YBX3	P16989	372 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	AKAP5	P24588	427 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ACAT1	P24752	427 aa	Known RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SERPINA4	P29622	427 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MACC1	Q6ZN28	852 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	OTOP1	Q7RTM1	612 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	ZNF655	Q8N720	491 aa	Predicted RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	UTP15	Q8TED0	518 aa	Known RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	POLR1E	Q9GZS1	481 aa	Known RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	IL25	Q9H293	177 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	LACTBL1	A8MY62	500 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TSPAN3	O60637	253 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	NFIC	P08651	508 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MGAT1	P26572	445 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	PPAT	Q06203	517 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	RRP1B	Q14684	758 aa	Known RBP	13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TMEM119	Q4V9L6	283 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	EPHX4	Q8IUS5	362 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	MOSPD2	Q8NHP6	518 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	SLC2A14	Q8TDB8	520 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TMEM237	Q96Q45	408 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	TMCO1	Q9UM00	188 aa		13.91	□□□□□ -0.18
YTHDF3-208	ENST00000615676	CCDC189	A1A4V9	331 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	LTF	P02788	710 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	AMPD1	P23109	780 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FEN1	P39748	380 aa	Known RBP	13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	NAA20	P61599	178 aa		13.9	□□□□□ -0.18
YTHDF3-208	ENST00000615676	FASTK	Q14296	549 aa	Known RBP	13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms