RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CYB5D2Q8WUJ1 264 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 LMLNQ96KR4 655 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 IRX2Q9BZI1 471 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-211ENST00000615061 LUC7L2Q9Y383 392 aaKnown RBP17.29■□□□□ 0.36
CBWD3-211ENST00000615061 CEP250Q9BV73 2442 aa17.29■□□□□ 0.36
CBWD3-211ENST00000615061 MUC22E2RYF6 1773 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-211ENST00000615061 TCRBV21S2A2A0A5A6 115 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 AXIN1O15169 862 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 LUC7L3O95232 432 aaKnown RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 F9P00740 461 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 LMNAP02545 664 aaKnown RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 TPM3P06753 285 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 SDC4P31431 198 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 CDH18Q13634 790 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 ZNF234Q14588 700 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 FUT11Q495W5 492 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 BRMS1LQ5PSV4 323 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 SND1Q7KZF4 910 aaKnown RBP eCLIP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 TRMT11Q7Z4G4 463 aaKnown RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 KIAA0907Q7Z7F0 614 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 RASSF3Q86WH2 238 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 FIBINQ8TAL6 211 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 RPRD1AQ96P16 312 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 MCEEQ96PE7 176 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 GABRG3Q99928 467 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 EPC1Q9H2F5 836 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 CD248Q9HCU0 757 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 THAP10Q9P2Z0 257 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 EBF1Q9UH73 591 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 INTS6Q9UL03 887 aaKnown RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 INVSQ9Y283 1065 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 STON1Q9Y6Q2 735 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 RALGAPA1Q6GYQ0 2036 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 SIGLEC16A6NMB1 481 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 CBFA2T2O43439 604 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 ENDOD1O94919 500 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 PPP1R15BQ5SWA1 713 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 MBLAC2Q68D91 279 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 PRR23BQ6ZRT6 265 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 CCAR2Q8N163 923 aaKnown RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 HMGB4Q8WW32 186 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 SYN2Q92777 582 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-211ENST00000615061 ADAMTS1Q9UHI8 967 aa17.28■□□□□ 0.36
CBWD3-211ENST00000615061 THADAQ6YHU6 1953 aa17.27■□□□□ 0.36
CBWD3-211ENST00000615061 CCDC163A0A0D9SF12 145 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 H0Y626 953 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 DCLK1O15075 740 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 FTLP02792 175 aaPredicted RBP17.27■□□□□ 0.35
CBWD3-211ENST00000615061 PTPN9P43378 593 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 HDAC4P56524 1084 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 EIF4HQ15056 248 aaKnown RBP17.27■□□□□ 0.35
CBWD3-211ENST00000615061 SPECC1LQ69YQ0 1117 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 VSTM4Q8IW00 320 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 AHI1Q8N157 1196 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 FAM172AQ8WUF8 416 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 UCMAQ8WVF2 138 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 MAGEB5Q9BZ81 275 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 SEMA4AQ9H3S1 761 aa17.27■□□□□ 0.35
CBWD3-211ENST00000615061 POLMQ9NP87 494 aaPredicted RBP17.27■□□□□ 0.35
CBWD3-211ENST00000615061 SMG5Q9UPR3 1016 aaKnown RBP17.27■□□□□ 0.35
CBWD3-211ENST00000615061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.27■□□□□ 0.35
CBWD3-211ENST00000615061 DNAH14Q0VDD8 3507 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 CNTN5O94779 1100 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 GZMAP12544 262 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 HLA-EP13747 358 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 GPD1P21695 349 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 PRKCHP24723 683 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 OGDHQ02218 1023 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 SIM2Q14190 667 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-211ENST00000615061 PTPRNQ16849 979 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 RABGAP1LQ5R372 815 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 ARTNQ5T4W7 220 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 SDE2Q6IQ49 451 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 GAS2L3Q86XJ1 694 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 ZNF683Q8IZ20 524 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 ZNF366Q8N895 744 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 OR52K2Q8NGK3 314 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 WFIKKN2Q8TEU8 576 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 CENPIQ92674 756 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-211ENST00000615061 IQCDQ96DY2 449 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.26■□□□□ 0.35
CBWD3-211ENST00000615061 RBSNQ9H1K0 784 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 SLC6A17Q9H1V8 727 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 ARHGAP20Q9P2F6 1191 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 NUMA1Q14980 2115 aa17.26■□□□□ 0.35
CBWD3-211ENST00000615061 A0A1B0GVM2 712 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 TCAF2A6NFQ2 919 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 CCP110O43303 1012 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 RPP40O75818 363 aaKnown RBP17.25■□□□□ 0.35
CBWD3-211ENST00000615061 SERPING1P05155 500 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 GABRG2P18507 467 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 CSKP41240 450 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 MAMLD1Q13495 774 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 ENPP2Q13822 863 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 ALFQ53S48 1182 aa17.25■□□□□ 0.35
CBWD3-211ENST00000615061 CXorf57Q6NSI4 855 aaKnown RBP17.25■□□□□ 0.35
CBWD3-211ENST00000615061 APCDD1Q8J025 514 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms