RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 TMEM176AQ96HP8 235 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 OMDQ99983 421 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 RSPH9Q9H1X1 276 aaPredicted RBP6.55□□□□□ -1.36
CUX1-220ENST00000607092 BLZF1Q9H2G9 400 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 PABPC3Q9H361 631 aaKnown RBP6.55□□□□□ -1.36
CUX1-220ENST00000607092 KCTD10Q9H3F6 313 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 C6orf106Q9H6K1 298 aaPredicted RBP6.55□□□□□ -1.36
CUX1-220ENST00000607092 ERVMER34-1Q9H9K5 563 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 CD93Q9NPY3 652 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 CNGB3Q9NQW8 809 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 CISHQ9NSE2 258 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 ABCB8Q9NUT2 735 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 FBXL12Q9NXK8 326 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 HMGXB4Q9UGU5 601 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 ADAMTS1Q9UHI8 967 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 NUDT5Q9UKK9 219 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 DMTF1Q9Y222 760 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 AK5Q9Y6K8 562 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 CKAP5Q14008 2032 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 MYH10P35580 1976 aa6.55□□□□□ -1.36
CUX1-220ENST00000607092 EDDM13A0A1B0GTR0 161 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 SLC7A4O43246 635 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 RNGTTO60942 597 aaKnown RBP6.54□□□□□ -1.36
CUX1-220ENST00000607092 FBXO21O94952 628 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 HSP90AA1P07900 732 aaKnown RBP6.54□□□□□ -1.36
CUX1-220ENST00000607092 TBXAS1P24557 533 aaPredicted RBP6.54□□□□□ -1.36
CUX1-220ENST00000607092 HLA-FP30511 346 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 EIF2S3P41091 472 aaKnown RBP6.54□□□□□ -1.36
CUX1-220ENST00000607092 RXRGP48443 463 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 GCLMP48507 274 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 PGFP49763 221 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 MXI1P50539 228 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 DLG4P78352 724 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 SULT2A1Q06520 285 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 CETN1Q12798 172 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 STK4Q13043 487 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 NNTQ13423 1086 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 ADAM9Q13443 819 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 CUL4BQ13620 913 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 SLC12A1Q13621 1099 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 CDH18Q13634 790 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 CST6Q15828 149 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 HNRNPA1L2Q32P51 320 aaKnown RBP6.54□□□□□ -1.36
CUX1-220ENST00000607092 SGO2Q562F6 1265 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 C6orf132Q5T0Z8 1188 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 FAM46CQ5VWP2 391 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 DHRS13Q6UX07 377 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 SND1Q7KZF4 910 aaKnown RBP eCLIP6.54□□□□□ -1.36
CUX1-220ENST00000607092 GPR155Q7Z3F1 870 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 KIAA0907Q7Z7F0 614 aaPredicted RBP6.54□□□□□ -1.36
CUX1-220ENST00000607092 CACUL1Q86Y37 369 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 FMNL3Q8IVF7 1028 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 MFN1Q8IWA4 741 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 GUF1Q8N442 669 aaKnown RBP6.54□□□□□ -1.36
CUX1-220ENST00000607092 MFSD2AQ8NA29 543 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 FIBINQ8TAL6 211 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 FAM174AQ8TBP5 190 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 TAS1R2Q8TE23 839 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 KCTD13Q8WZ19 329 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 COL26A1Q96A83 441 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 TTC17Q96AE7 1141 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 ERLEC1Q96DZ1 483 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 CNDP2Q96KP4 475 aaKnown RBP6.54□□□□□ -1.36
CUX1-220ENST00000607092 SERPINB11Q96P15 392 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 TWNKQ96RR1 684 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 USP29Q9HBJ7 922 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 PRSS16Q9NQE7 514 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 AASDHPPTQ9NRN7 309 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 RAB20Q9NX57 234 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 BTBD3Q9Y2F9 522 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 CEP83Q9Y592 693 aa6.54□□□□□ -1.36
CUX1-220ENST00000607092 COL5A1P20908 1838 aaPredicted RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 K7ELQ4 463 aaPredicted RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 TLR4O00206 839 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 PLK4O00444 970 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 CETN3O15182 167 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 ACSL4O60488 711 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 RNASEH2AO75792 299 aaKnown RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 RHOBTB3O94955 611 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 IGHV4-34P06331 123 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 ALPPL2P10696 532 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 EPB41P11171 864 aaKnown RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 VDRP11473 427 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 GOT1P17174 413 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 CKMT2P17540 419 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 C5AR1P21730 350 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 EPHA8P29322 1005 aaPredicted RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 DUSP3P51452 185 aaPredicted RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 GALCP54803 685 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 MCCD1P59942 119 aaPredicted RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 NUCB2P80303 420 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 RHDQ02161 417 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 SEMG2Q02383 582 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 ELAVL3Q14576 367 aaKnown RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 EDRF1Q3B7T1 1238 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 ZNF394Q53GI3 561 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 TTC39BQ5VTQ0 682 aaPredicted RBP6.53□□□□□ -1.36
CUX1-220ENST00000607092 BSPRYQ5W0U4 402 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 TMEM215Q68D42 235 aa6.53□□□□□ -1.36
CUX1-220ENST00000607092 SPOPLQ6IQ16 392 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms