RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 DTNAQ9Y4J8 743 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 ZNF236Q9UL36 1845 aa13.59□□□□□ -0.23
VRK3-209ENST00000594948 MYO18AQ92614 2054 aaKnown RBP13.58□□□□□ -0.24
VRK3-209ENST00000594948 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.58□□□□□ -0.24
VRK3-209ENST00000594948 NOP56O00567 594 aaKnown RBP13.58□□□□□ -0.24
VRK3-209ENST00000594948 MAP3K6O95382 1288 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 POLBP06746 335 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 THRAP10827 490 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 DPEP1P16444 411 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 GLDCP23378 1020 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 MGAT1P26572 445 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 TYK2P29597 1187 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 SERPINB6P35237 376 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 PRKAA2P54646 552 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 DLG1Q12959 904 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 SNAPC2Q13487 334 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 LAMB3Q13751 1172 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 LY6KQ17RY6 165 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 CASC4Q6P4E1 433 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 C16orf89Q6UX73 402 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 ATG14Q6ZNE5 492 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 RSPH3Q86UC2 560 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 ALDH16A1Q8IZ83 802 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 CLMNQ96JQ2 1002 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 GGA3Q9NZ52 723 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 IGSF9Q9P2J2 1179 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 TXNDC16Q9P2K2 825 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 RAB26Q9ULW5 256 aa13.58□□□□□ -0.24
VRK3-209ENST00000594948 FNDC1Q4ZHG4 1894 aaPredicted RBP13.58□□□□□ -0.24
VRK3-209ENST00000594948 SCN1AP35498 2009 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 APOA4P06727 396 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 NCF2P19878 526 aaPredicted RBP13.57□□□□□ -0.24
VRK3-209ENST00000594948 ARRB2P32121 409 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 SPRP35270 261 aaPredicted RBP13.57□□□□□ -0.24
VRK3-209ENST00000594948 ARL4AP40617 200 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 RGS2P41220 211 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 GRIA2P42262 883 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 ALDH1A3P47895 512 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 ZNF484Q5JVG2 852 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 UNC93AQ86WB7 457 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 HPS6Q86YV9 775 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
VRK3-209ENST00000594948 UNC5BQ8IZJ1 945 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 PQLC1Q8N2U9 271 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 DRAXINQ8NBI3 349 aaPredicted RBP13.57□□□□□ -0.24
VRK3-209ENST00000594948 SLC7A14Q8TBB6 771 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 OPTNQ96CV9 577 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 CERS2Q96G23 380 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 NDNQ99608 321 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 RBBP8Q99708 897 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 DERAQ9Y315 318 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
VRK3-209ENST00000594948 BTBD19C9JJ37 291 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 GABBR2O75899 941 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 C22orf31O95567 290 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 HSPA4LO95757 839 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 SMIM18P0DKX4 95 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 ERFP50548 548 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 LIMK2P53671 638 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 FOLH1Q04609 750 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 MAP7Q14244 749 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 HERC3Q15034 1050 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 HSDL1Q3SXM5 330 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 CLEC14AQ86T13 490 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 TRIM50Q86XT4 487 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 EGFL6Q8IUX8 553 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 PHTF2Q8N3S3 785 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 RDH11Q8TC12 318 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 DGCR14Q96DF8 476 aaKnown RBP13.57□□□□□ -0.24
VRK3-209ENST00000594948 KLRG1Q96E93 195 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 COG4Q9H9E3 785 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 CYP4F11Q9HBI6 524 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 SNX15Q9NRS6 342 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 PTTG2Q9NZH5 202 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 ATXN10Q9UBB4 475 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 TMCO1Q9UM00 188 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 PSAT1Q9Y617 370 aa13.57□□□□□ -0.24
VRK3-209ENST00000594948 PAPPA2Q9BXP8 1791 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 ZBTB14O43829 449 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 ARIH2O95376 493 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 CAPNS1P04632 268 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 ACADSBP45954 432 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 RPL5P46777 297 aaKnown RBP13.56□□□□□ -0.24
VRK3-209ENST00000594948 HSPA13P48723 471 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 CLCN3P51790 818 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 R3HDM1Q15032 1099 aaKnown RBP13.56□□□□□ -0.24
VRK3-209ENST00000594948 RARS2Q5T160 578 aaKnown RBP13.56□□□□□ -0.24
VRK3-209ENST00000594948 LCA5Q86VQ0 697 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 MICALL2Q8IY33 904 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 AHI1Q8N157 1196 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 CPSF7Q8N684 471 aaKnown RBP13.56□□□□□ -0.24
VRK3-209ENST00000594948 LINC01465Q8N7H1 131 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 C12orf29Q8N999 325 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 RP9Q8TA86 221 aaKnown RBP13.56□□□□□ -0.24
VRK3-209ENST00000594948 DLG3Q92796 817 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 DCUN1D1Q96GG9 259 aa13.56□□□□□ -0.24
VRK3-209ENST00000594948 ZFRQ96KR1 1074 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms