RNA–Protein interactions for RNA: ENST00000592242.1

PPP6R1-208, Transcript of protein phosphatase 6 regulatory subunit 1, human

TSL 4

Gene PPP6R1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R1-208	ENST00000592242	PRPF39	Q86UA1	669 aa	Known RBP	12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CRYBG2	Q8N1P7	616 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	AADAT	Q8N5Z0	425 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	WDR36	Q8NI36	951 aa	Known RBP	12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	DNAJC19	Q96DA6	116 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	LIN37	Q96GY3	246 aa	Predicted RBP	12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	APOLD1	Q96LR9	279 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	SMYD3	Q9H7B4	428 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	VRTN	Q9H8Y1	702 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	LRRC4C	Q9HCJ2	640 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	PNPLA8	Q9NP80	782 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	OLFML3	Q9NRN5	406 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	NLGN3	Q9NZ94	848 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D7	Q9P0N9	293 aa		12.01	□□□□□ -0.49
PPP6R1-208	ENST00000592242	FFAR2	O15552	330 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	PIAS2	O75928	621 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ITGA2B	P08514	1039 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ALPPL2	P10696	532 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	POLR2E	P19388	210 aa	Known RBP	12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	HMGN5	P82970	282 aa	Known RBP	12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	STAT4	Q14765	748 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	HNRNPA1L2	Q32P51	320 aa	Known RBP	12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CLEC20A	Q6ZU45	233 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	MMAA	Q8IVH4	418 aa	Known RBP	12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	FAM184A	Q8NB25	1140 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	KDM1B	Q8NB78	822 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	OR14C36	Q8NHC7	312 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	IFI44	Q8TCB0	444 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	SYAP1	Q96A49	352 aa	Predicted RBP	12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TTC17	Q96AE7	1141 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	FAM129B	Q96TA1	746 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CGRRF1	Q99675	332 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	KIAA1586	Q9HCI6	787 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	EVA1B	Q9NVM1	165 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CYTH4	Q9UIA0	394 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	STOML2	Q9UJZ1	356 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ACSL6	Q9UKU0	697 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	SRPK3	Q9UPE1	567 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	PCDHGA7	Q9Y5G6	932 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	USP3	Q9Y6I4	520 aa		12	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TP53BP1	Q12888	1972 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ICE1	Q9Y2F5	2266 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3D	A0A087WVF3	549 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3I	A0A087WXS9	549 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3E	A0A087X179	549 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3K	A0A087X1G2	549 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3L	B9A6J9	549 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	SCAMP1	O15126	338 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3H	P0C7X1	549 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	FAM200B	P0CF97	657 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TNNI1	P19237	187 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	RIPPLY3	P57055	190 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ZNF445	P59923	1031 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	KCNMA1	Q12791	1236 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	EFEMP1	Q12805	493 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	SRSF6	Q13247	344 aa	Known RBP	11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TRPC3	Q13507	836 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CLCA4	Q14CN2	919 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	PSMD6	Q15008	389 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TRIP4	Q15650	581 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3G	Q6DHY5	549 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3C	Q6IPX1	549 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	C12orf29	Q8N999	325 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TPCN2	Q8NHX9	752 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ZNF516	Q92618	1163 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	FAM131C	Q96AQ9	280 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TMA16	Q96EY4	203 aa	Known RBP	11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	KLHDC7B	Q96G42	594 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	LMLN	Q96KR4	655 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	MRGPRX3	Q96LB0	322 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	FGFBP2	Q9BYJ0	223 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	SDCBP2	Q9H190	292 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	KDM4C	Q9H3R0	1056 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	KIF3A	Q9Y496	699 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	C2CD3	Q4AC94	2353 aa		11.99	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CCDC187	A0A096LP49	1063 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	SLC12A8	A0AV02	714 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TARSL2	A2RTX5	802 aa	Known RBP	11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	PRAMEF26	H0Y7S4	382 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242		K7ESM1	405 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TCEA3	O75764	348 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ADH1B	P00325	375 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	DLAT	P10515	647 aa	Known RBP	11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	C5AR1	P21730	350 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CD70	P32970	193 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	CASR	P41180	1078 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	NEK4	P51957	841 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	ST8SIA6	P61647	398 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	MORC3	Q14149	939 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	TGIF1	Q15583	401 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	SKIDA1	Q1XH10	827 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	FOXR1	Q6PIV2	292 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	RBM44	Q6ZP01	1051 aa	Known RBP	11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	PTRH1	Q86Y79	214 aa	Known RBP	11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	PLD4	Q96BZ4	506 aa		11.98	□□□□□ -0.49
PPP6R1-208	ENST00000592242	DUSP23	Q9BVJ7	150 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms