RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 FOSP01100 380 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-209ENST00000589941 SERPINF2P08697 491 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 SMARCA1P28370 1054 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 ELF1P32519 619 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 CLCNKBP51801 687 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 NCKAP1LP55160 1127 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 CXADRP78310 365 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 ELAVL2Q12926 359 aaKnown RBP8.37□□□□□ -1.07
SMAD4-209ENST00000589941 LSAMPQ13449 338 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 HNRNPDQ14103 355 aaKnown RBP8.37□□□□□ -1.07
SMAD4-209ENST00000589941 NOLC1Q14978 699 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMAD4-209ENST00000589941 DPH6Q7L8W6 267 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 GPR155Q7Z3F1 870 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 HAUS6Q7Z4H7 955 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 GLRX5Q86SX6 157 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 C11orf74Q86VG3 221 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 TTC9BQ8N6N2 239 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 BHLHE22Q8NFJ8 381 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-209ENST00000589941 KIAA1524Q8TCG1 905 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 BPIFB1Q8TDL5 484 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 PSPC1Q8WXF1 523 aaKnown RBP8.37□□□□□ -1.07
SMAD4-209ENST00000589941 CCDC51Q96ER9 411 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 PKNOX2Q96KN3 472 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 ZNF512Q96ME7 567 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-209ENST00000589941 MAP3K14Q99558 947 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 CDIP1Q9H305 208 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 IL21RQ9HBE5 538 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 GKN1Q9NS71 199 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 FBXL5Q9UKA1 691 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 SMC3Q9UQE7 1217 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 TRAF6Q9Y4K3 522 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 X6R8D5 127 aa8.37□□□□□ -1.07
SMAD4-209ENST00000589941 SMCO2A6NFE2 343 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 E7EWF7 191 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 TMEM189-UBE2V1I3L0A0 370 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 INO80B-WBP1J3KQ70 363 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 GAS7O60861 476 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 SOAT2O75908 522 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 LARGE1O95461 756 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 ADCY5O95622 1261 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 EDN1P05305 212 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 CSRP3P50461 194 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 RUNX3Q13761 415 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 CAPSQ13938 189 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 EMC2Q15006 297 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 SYCP1Q15431 976 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 DUOXA1Q1HG43 343 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 TAF1BQ53T94 588 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-209ENST00000589941 GPR158Q5T848 1215 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 SLC27A1Q6PCB7 646 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 FERMT3Q86UX7 667 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 TICAM2Q86XR7 235 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 CILP2Q8IUL8 1156 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 ELMOD1Q8N336 334 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 CCDC33Q8N5R6 958 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 SLC5A5Q92911 643 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 KISS1RQ969F8 398 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-209ENST00000589941 TRMT2BQ96GJ1 504 aaKnown RBP8.36□□□□□ -1.07
SMAD4-209ENST00000589941 P2RY13Q9BPV8 354 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 LZTS2Q9BRK4 669 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 DHRS4Q9BTZ2 278 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 DHX33Q9H6R0 707 aaKnown RBP8.36□□□□□ -1.07
SMAD4-209ENST00000589941 ZDHHC4Q9NPG8 344 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 XPNPEP1Q9NQW7 623 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 ANKMY1Q9P2S6 941 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 TBX20Q9UMR3 447 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 PCDHA5Q9Y5H7 936 aa8.36□□□□□ -1.07
SMAD4-209ENST00000589941 B3GAT3O94766 335 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 THP07101 528 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 OR4Q2P0C623 313 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 DRD1P21728 446 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 GJB2P29033 226 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 AXLP30530 894 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 GJA4P35212 333 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 JAK3P52333 1124 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 PTENP60484 403 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 SEMG2Q02383 582 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 TLE3Q04726 772 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 MYO1EQ12965 1108 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 LONRF2Q1L5Z9 754 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 C2orf27AQ580R0 203 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 LRCH2Q5VUJ6 765 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 B3GNT9Q6UX72 402 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 MIER3Q7Z3K6 550 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 SLC41A1Q8IVJ1 513 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 IGDCC3Q8IVU1 814 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 LEMD2Q8NC56 503 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 MZB1Q8WU39 189 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 CCDC94Q9BW85 323 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-209ENST00000589941 PRDM16Q9HAZ2 1276 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 PDRG1Q9NUG6 133 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 OBP2AQ9NY56 170 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 PRDM4Q9UKN5 801 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 BTBD3Q9Y2F9 522 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 CABIN1Q9Y6J0 2220 aa8.35□□□□□ -1.07
SMAD4-209ENST00000589941 SH2B2O14492 632 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-209ENST00000589941 AP5Z1O43299 807 aa8.34□□□□□ -1.07
SMAD4-209ENST00000589941 CTIFO43310 598 aaKnown RBP8.34□□□□□ -1.07
SMAD4-209ENST00000589941 PSMD10O75832 226 aa8.34□□□□□ -1.07
SMAD4-209ENST00000589941 PTMAP06454 111 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms