RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 KCNK3O14649 394 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 SIN3BO75182 1162 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 FBXO21O94952 628 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 FSBPO95073 299 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 CSKP41240 450 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 STILQ15468 1287 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 TTC31Q49AM3 519 aaPredicted RBP22.81■■□□□ 1.24
SNF8-216ENST00000573795 FSCBQ5H9T9 825 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 ISM2Q6H9L7 571 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 TTI2Q6NXR4 508 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 MMS22LQ6ZRQ5 1243 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 RRAGAQ7L523 313 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 GOLGA1Q92805 767 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 MIS12Q9H081 205 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 PABPC3Q9H361 631 aaKnown RBP22.81■■□□□ 1.24
SNF8-216ENST00000573795 GPSM3Q9Y4H4 160 aa22.81■■□□□ 1.24
SNF8-216ENST00000573795 C10orf142B7Z368 130 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 H0Y8X5 98 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 PSMA7O14818 248 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 CTSKP43235 329 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 TEAD4Q15561 434 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 HNRNPA1L2Q32P51 320 aaKnown RBP22.8■■□□□ 1.24
SNF8-216ENST00000573795 MS4A13Q5J8X5 152 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 TMPRSS7Q7RTY8 843 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 MARCH9Q86YJ5 346 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 MDM1Q8TC05 714 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 IGSF8Q969P0 613 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 DHTKD1Q96HY7 919 aaPredicted RBP22.8■■□□□ 1.24
SNF8-216ENST00000573795 KREMEN1Q96MU8 473 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 TIGD1Q96MW7 591 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 CDC6Q99741 560 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 XPO7Q9UIA9 1087 aaKnown RBP22.8■■□□□ 1.24
SNF8-216ENST00000573795 MAN1B1Q9UKM7 699 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 NAALADL1Q9UQQ1 740 aa22.8■■□□□ 1.24
SNF8-216ENST00000573795 BMP6P22004 513 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 CTSOP43234 321 aaPredicted RBP22.79■■□□□ 1.24
SNF8-216ENST00000573795 GPD2P43304 727 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 GCNT1Q02742 428 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 NNTQ13423 1086 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 COL9A2Q14055 689 aaPredicted RBP22.79■■□□□ 1.24
SNF8-216ENST00000573795 CCDC40Q4G0X9 1142 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 KIAA0895LQ68EN5 471 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 USP30Q70CQ3 517 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 TAC4Q86UU9 113 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 SCUBE3Q8IX30 993 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 ZNF557Q8N988 423 aaPredicted RBP22.79■■□□□ 1.24
SNF8-216ENST00000573795 ADAM32Q8TC27 787 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 SERPINB11Q96P15 392 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 GTPBP4Q9BZE4 634 aaKnown RBP22.79■■□□□ 1.24
SNF8-216ENST00000573795 CCDC86Q9H6F5 360 aaKnown RBP22.79■■□□□ 1.24
SNF8-216ENST00000573795 EBF2Q9HAK2 575 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 TLR6Q9Y2C9 796 aa22.79■■□□□ 1.24
SNF8-216ENST00000573795 P4HA2O15460 535 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 ASLP04424 464 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 ARID5BQ14865 1188 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 DCAF6Q58WW2 860 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 PITRM1Q5JRX3 1037 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 C9orf64Q5T6V5 341 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 SYPL2Q5VXT5 272 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 IGSF10Q6WRI0 2623 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 DHX40Q8IX18 779 aaKnown RBP22.78■■□□□ 1.24
SNF8-216ENST00000573795 CFAP52Q8N1V2 620 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 CARNMT1Q8N4J0 409 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 FBXL12Q9NXK8 326 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 SCML1Q9UN30 329 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 CNTN6Q9UQ52 1028 aa22.78■■□□□ 1.24
SNF8-216ENST00000573795 GOLGA4Q13439 2230 aaKnown RBP22.77■■□□□ 1.24
SNF8-216ENST00000573795 PPP1R3GB7ZBB8 358 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 MID1O15344 667 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 PAPSS1O43252 624 aaPredicted RBP22.77■■□□□ 1.24
SNF8-216ENST00000573795 PCDHGA12O60330 932 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 LUC7L3O95232 432 aaKnown RBP22.77■■□□□ 1.24
SNF8-216ENST00000573795 CCT8P50990 548 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 GALCP54803 685 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 SUZ12Q15022 739 aaKnown RBP22.77■■□□□ 1.24
SNF8-216ENST00000573795 CST6Q15828 149 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 DENND1BQ6P3S1 775 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 KDM1BQ8NB78 822 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 EHBP1Q8NDI1 1231 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 SLC6A18Q96N87 628 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 DDX50Q9BQ39 737 aaKnown RBP22.77■■□□□ 1.24
SNF8-216ENST00000573795 CYTH4Q9UIA0 394 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 ERVW-1Q9UQF0 538 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 ITIH6Q6UXX5 1313 aa22.77■■□□□ 1.24
SNF8-216ENST00000573795 COL5A1P20908 1838 aaPredicted RBP22.76■■□□□ 1.23
SNF8-216ENST00000573795 A0A1W2PP55 124 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 GOLGA8CPA6NN73 597 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 TTC34A8MYJ7 566 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 MOCS2O96007 188 aaPredicted RBP22.76■■□□□ 1.23
SNF8-216ENST00000573795 IGLV3-25P01717 112 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 WNT1P04628 370 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 ST8SIA6P61647 398 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 IL9RQ01113 521 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 STIM1Q13586 685 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 CDH18Q13634 790 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 KLHL10Q6JEL2 608 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 NCEH1Q6PIU2 408 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 C19orf48Q6RUI8 117 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 BEND5Q7L4P6 421 aa22.76■■□□□ 1.23
SNF8-216ENST00000573795 TRIM59Q8IWR1 403 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms