RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 FIBINQ8TAL6 211 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 KCTD13Q8WZ19 329 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 BAP1Q92560 729 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 FGF11Q92914 225 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 PAGE5Q96GU1 130 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 MRGPRX3Q96LB0 322 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 SLC6A18Q96N87 628 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 FCRL3Q96P31 734 aaPredicted RBP13.27□□□□□ -0.29
RNF40-208ENST00000565995 ULBP1Q9BZM6 244 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 TMEM8AQ9HCN3 771 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 EXOC1Q9NV70 894 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 SERGEFQ9UGK8 458 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 SFMBT1Q9UHJ3 866 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 DOCK4Q8N1I0 1966 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 LRRC72A6NJI9 287 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 YJEFN3A6XGL0 299 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 E7ENQ6 273 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 CBX4O00257 560 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 TULP2O00295 520 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 CAPN9O14815 690 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 F13A1P00488 732 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 ASLP04424 464 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 ABCB4P21439 1286 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 EPHA8P29322 1005 aaPredicted RBP13.26□□□□□ -0.29
RNF40-208ENST00000565995 ARRB1P49407 418 aaPredicted RBP13.26□□□□□ -0.29
RNF40-208ENST00000565995 SEMG2Q02383 582 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 CST6Q15828 149 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 FAM133BQ5BKY9 247 aaKnown RBP13.26□□□□□ -0.29
RNF40-208ENST00000565995 PRAMEF14Q5SWL7 426 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 C9orf64Q5T6V5 341 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 HES3Q5TGS1 186 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 KRT39Q6A163 491 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 NCEH1Q6PIU2 408 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 ITIH6Q6UXX5 1313 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 GPR155Q7Z3F1 870 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 ZNF605Q86T29 641 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 CEP57L1Q8IYX8 460 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 OXR1Q8N573 874 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 EID2Q8N6I1 236 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 NDRG1Q92597 394 aaKnown RBP13.26□□□□□ -0.29
RNF40-208ENST00000565995 SEMA4DQ92854 862 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 FAM131CQ96AQ9 280 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 WBP1Q96G27 269 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 FAM129BQ96TA1 746 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 NEUROG2Q9H2A3 272 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 GDF3Q9NR23 364 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 SERTAD1Q9UHV2 236 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 INTS6Q9UL03 887 aaKnown RBP13.26□□□□□ -0.29
RNF40-208ENST00000565995 AK5Q9Y6K8 562 aa13.26□□□□□ -0.29
RNF40-208ENST00000565995 TLR4O00206 839 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 WNT9AO14904 365 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 LATO43561 262 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 RNASEH1O60930 286 aaKnown RBP13.25□□□□□ -0.29
RNF40-208ENST00000565995 SIN3BO75182 1162 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 SRPRAP08240 638 aaKnown RBP13.25□□□□□ -0.29
RNF40-208ENST00000565995 TRIM49P0CI25 452 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 TRIM49CP0CI26 452 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 CKMT2P17540 419 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 NR2F2P24468 414 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 ACP1P24666 158 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 SLC6A4P31645 630 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 PSMC2P35998 433 aaKnown RBP13.25□□□□□ -0.29
RNF40-208ENST00000565995 NXPH1P58417 271 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 FOXD4L6Q3SYB3 417 aaPredicted RBP13.25□□□□□ -0.29
RNF40-208ENST00000565995 PKDCCQ504Y2 493 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 ATL3Q6DD88 541 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 FOXD4L3Q6VB84 417 aaPredicted RBP13.25□□□□□ -0.29
RNF40-208ENST00000565995 SND1Q7KZF4 910 aaKnown RBP eCLIP13.25□□□□□ -0.29
RNF40-208ENST00000565995 UNC45BQ8IWX7 931 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 DCBLD1Q8N8Z6 715 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 MFSD2AQ8NA29 543 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 FBXL13Q8NEE6 735 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 RNF139Q8WU17 664 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 MTG2Q9H4K7 406 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 CNGB3Q9NQW8 809 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 USP25Q9UHP3 1055 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 RP1P56715 2156 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 PIEZO2Q9H5I5 2752 aa13.25□□□□□ -0.29
RNF40-208ENST00000565995 MID1O15344 667 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 ACSL4O60488 711 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 TBL1XO60907 577 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 KRT13P13646 458 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 GOT1P17174 413 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 SLC8A1P32418 973 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 ACTN2P35609 894 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 CSKP41240 450 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 CLDN6P56747 220 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 DAOAP59103 153 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 ST8SIA6P61647 398 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 TLE3Q04726 772 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 BST2Q10589 180 aaKnown RBP13.24□□□□□ -0.29
RNF40-208ENST00000565995 BNIP3Q12983 259 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 NUGGCQ68CJ6 796 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 IQCHQ86VS3 1027 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 ERICH1Q86X53 443 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 FAM186BQ8IYM0 893 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 IRGQQ8WZA9 623 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 EDEM1Q92611 657 aa13.24□□□□□ -0.29
RNF40-208ENST00000565995 TATDN2Q93075 761 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms