RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 GBE1Q04446 702 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 HABP4Q5JVS0 413 aaKnown RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 KYAT3Q6YP21 454 aaKnown RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 DHDDSQ86SQ9 333 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 SPATA2LQ8IUW3 424 aaPredicted RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 BBS5Q8N3I7 341 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 RBM15BQ8NDT2 890 aaKnown RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 GFM2Q969S9 779 aaKnown RBP10.72□□□□□ -0.69
RNF40-204ENST00000563683 ATP6V1E2Q96A05 226 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 PANX3Q96QZ0 392 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 LHX5Q9H2C1 402 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 NR2E3Q9Y5X4 410 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 SNCAIPQ9Y6H5 919 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 ARFGEF1Q9Y6D6 1849 aa10.72□□□□□ -0.69
RNF40-204ENST00000563683 CLDN5O00501 218 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 RNASEH1O60930 286 aaKnown RBP10.71□□□□□ -0.69
RNF40-204ENST00000563683 HOXC6P09630 235 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 ERVK-10P10266 1014 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 HUNKP57058 714 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 KIF19Q2TAC6 998 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 PIGZQ86VD9 579 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 PDSS2Q86YH6 399 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 NXF3Q9H4D5 531 aaKnown RBP10.71□□□□□ -0.69
RNF40-204ENST00000563683 Q9H521 79 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 OCEL1Q9H607 264 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 SP110Q9HB58 689 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 IARS2Q9NSE4 1012 aaKnown RBP10.71□□□□□ -0.69
RNF40-204ENST00000563683 TSR3Q9UJK0 312 aaKnown RBP10.71□□□□□ -0.69
RNF40-204ENST00000563683 KLF11O14901 512 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 STRNO43815 780 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 GLRA3O75311 464 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 TSHRP16473 764 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 CYLC2Q14093 348 aaPredicted RBP10.71□□□□□ -0.69
RNF40-204ENST00000563683 SLC10A6Q3KNW5 377 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 KIAA1841Q6NSI8 718 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 RAB44Q7Z6P3 723 aaPredicted RBP10.71□□□□□ -0.69
RNF40-204ENST00000563683 ZNF276Q8N554 614 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 C12orf42Q96LP6 360 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 C1orf21Q9H246 121 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 ATXN3LQ9H3M9 355 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 VTA1Q9NP79 307 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 NUDT5Q9UKK9 219 aa10.71□□□□□ -0.69
RNF40-204ENST00000563683 PRG3Q9Y2Y8 225 aaPredicted RBP10.71□□□□□ -0.69
RNF40-204ENST00000563683 C17orf102A2RUQ5 167 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 E9PBE3 544 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 BNIP3LO60238 219 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 KLHL41O60662 606 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 RALBP11234 206 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 ZNF157P51786 506 aaPredicted RBP10.71□□□□□ -0.7
RNF40-204ENST00000563683 CHN2P52757 468 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 B3GNT6Q6ZMB0 384 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 JADE3Q92613 823 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 NMD3Q96D46 503 aaKnown RBP10.71□□□□□ -0.7
RNF40-204ENST00000563683 LPIN3Q9BQK8 851 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 PCDH18Q9HCL0 1135 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 S100A14Q9HCY8 104 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 TUBGCP4Q9UGJ1 667 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 PCDHGC3Q9UN70 934 aa10.71□□□□□ -0.7
RNF40-204ENST00000563683 UBA6A0AVT1 1052 aaPredicted RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 ARHGEF37A1IGU5 675 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 POMCP01189 267 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 THP07101 528 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 PIM1P11309 404 aaPredicted RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 GTF2A2P52657 109 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 BST1Q10588 318 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 GRM2Q14416 872 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 CCDC142Q17RM4 750 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 WSCD1Q658N2 575 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 TTC7BQ86TV6 843 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 PLD5Q8N7P1 536 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 TMA16Q96EY4 203 aaKnown RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 ELMO2Q96JJ3 720 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 LRRC40Q9H9A6 602 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 SLC38A7Q9NVC3 462 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 SLC7A8Q9UHI5 535 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 TCRBV7S3A2A0A539 114 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 BTBD19C9JJ37 291 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 CHADO15335 359 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 HNRNPRO43390 633 aaKnown RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 LGR5O75473 907 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 KLHL2O95198 593 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 USP17L7P0C7H9 530 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 PSMB4P28070 264 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 CCNFP41002 786 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 ASPAP45381 313 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 SCNN1BP51168 640 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 ATXN1P54253 815 aaKnown RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 RNF168Q8IYW5 571 aaPredicted RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 SKA2Q8WVK7 121 aaPredicted RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 PRR11Q96HE9 360 aaPredicted RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 GAD1Q99259 594 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 PRDM12Q9H4Q4 367 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 ABI2Q9NYB9 513 aaPredicted RBP10.7□□□□□ -0.7
RNF40-204ENST00000563683 THEGQ9P2T0 379 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 LRFN2Q9ULH4 789 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 SORCS3Q9UPU3 1222 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 BTAF1O14981 1849 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 TMEM63AO94886 807 aa10.7□□□□□ -0.7
RNF40-204ENST00000563683 DHRS4L1P0CG22 281 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms