RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MMAAQ8IVH4 418 aaKnown RBP10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 CARNMT1Q8N4J0 409 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 SLC4A11Q8NBS3 891 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 RBBP8NLQ8NC74 664 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 TATDN2Q93075 761 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 PAGE5Q96GU1 130 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 PABPC3Q9H361 631 aaKnown RBP10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 TMEM8AQ9HCN3 771 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 SCML1Q9UN30 329 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 PCDHGA1Q9Y5H4 931 aa10.91□□□□□ -0.66
CDC42BPB-207ENST00000560492 KNTC1P50748 2209 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 TDRD6O60522 2096 aaKnown RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 GOLGA6L7A0A1B0GV03 622 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 K7ELQ4 463 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 TULP2O00295 520 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 PIK3R2O00459 728 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 XPO1O14980 1071 aaKnown RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 ATXN7O15265 892 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 MID1O15344 667 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 YKT6O15498 198 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 TLX3O43711 291 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 SIN3BO75182 1162 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 CDK4P11802 303 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 RPL13P26373 211 aaKnown RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 MXI1P50539 228 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 RAD23BP54727 409 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 GALCP54803 685 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 CXADRP78310 365 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 PDE4CQ08493 712 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 BST2Q10589 180 aaKnown RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 CDH18Q13634 790 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 CST6Q15828 149 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 SGO2Q562F6 1265 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 RAB41Q5JT25 222 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 TCERG1LQ5VWI1 586 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 BSPRYQ5W0U4 402 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 KRT39Q6A163 491 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 USP30Q70CQ3 517 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 FAM217AQ8IXS0 508 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 ZNF557Q8N988 423 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 ANKRD52Q8NB46 1076 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 OR2T34Q8NGX1 318 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 OR14C36Q8NHC7 312 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 UBA3Q8TBC4 463 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 WFDC5Q8TCV5 224 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 SERAC1Q96JX3 654 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 NEUROG2Q9H2A3 272 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 ABCC13Q9NSE7 274 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 SERGEFQ9UGK8 458 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 TSPAN16Q9UKR8 245 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 RAI2Q9Y5P3 530 aa10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 SMG1Q96Q15 3661 aaKnown RBP10.9□□□□□ -0.66
CDC42BPB-207ENST00000560492 TBC1D3DA0A087WVF3 549 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3IA0A087WXS9 549 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3EA0A087X179 549 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3KA0A087X1G2 549 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3FA6NER0 549 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3LB9A6J9 549 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 MAPK13O15264 365 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 PAPSS1O43252 624 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 ACTN4O43707 911 aaKnown RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 MOCS3O95396 460 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 LATS1O95835 1130 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 MOCS2O96007 188 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 ASLP04424 464 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 WNT1P04628 370 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 C1SP09871 688 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3HP0C7X1 549 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 SLC8A1P32418 973 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 CSKP41240 450 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 ACADVLP49748 655 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 NUMBP49757 651 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 ADAM9Q13443 819 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 HS1BP3Q53T59 392 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TAF1BQ53T94 588 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 DCAF17Q5H9S7 520 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 ARHGAP17Q68EM7 881 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3GQ6DHY5 549 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3CQ6IPX1 549 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 SND1Q7KZF4 910 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 GPR155Q7Z3F1 870 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 UNC45BQ8IWX7 931 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 ZC3H3Q8IXZ2 948 aaKnown RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 TBC1D3Q8IZP1 549 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 HJURPQ8NCD3 748 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 FBXL13Q8NEE6 735 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 SEMA4DQ92854 862 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 EEF2KMTQ96G04 330 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 NAF1Q96HR8 494 aaKnown RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 KCNK17Q96T54 332 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 LGMNQ99538 433 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 DDX50Q9BQ39 737 aaKnown RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 UBXN6Q9BZV1 441 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 RSPH9Q9H1X1 276 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 RAB20Q9NX57 234 aa10.89□□□□□ -0.67
CDC42BPB-207ENST00000560492 A0A1B0GVL5 298 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 YJEFN3A6XGL0 299 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 E7ENQ6 273 aa10.88□□□□□ -0.67
CDC42BPB-207ENST00000560492 BRINP1O60477 761 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms