RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 FSD1LQ9BXM9 530 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 PITPNM3Q9BZ71 974 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 CRTAC1Q9NQ79 661 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 TBC1D13Q9NVG8 400 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 OR12D3Q9UGF7 316 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 JCHAINP01591 159 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 MX2P20592 715 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 IGFBP6P24592 240 aaPredicted RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 ZNF252P-AS1Q0IIN9 211 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 DPYSL3Q14195 570 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 INTS6LQ5JSJ4 861 aaKnown RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 CCDC80Q76M96 950 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 TSPAN18Q96SJ8 248 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 ALG13Q9NP73 1137 aaKnown RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 NINJ2Q9NZG7 142 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 CTNNAL1Q9UBT7 734 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 SLC25A52Q3SY17 297 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 WDR60Q8WVS4 1066 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 ERP27Q96DN0 273 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 UROC1Q96N76 676 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 RPRD1AQ96P16 312 aaPredicted RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 PPP1R10Q96QC0 940 aaKnown RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 SP110Q9HB58 689 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 SNX10Q9Y5X0 201 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 ZNFX1Q9P2E3 1918 aaKnown RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 CDH5P33151 784 aaPredicted RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 ZDHHC14Q8IZN3 488 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 IQCKQ8N0W5 287 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 TMEM237Q96Q45 408 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 CNGB3Q9NQW8 809 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 HAO1Q9UJM8 370 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 ZNF180Q9UJW8 692 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 CCNFP41002 786 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 SPARCL1Q14515 664 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 PCSK7Q16549 785 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 ART4Q93070 314 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 TMEM209Q96SK2 561 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 BFARQ9NZS9 450 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 DNAJB4Q9UDY4 337 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 RPL17P18621 184 aaKnown RBP17■□□□□ 0.31
PCNX1-209ENST00000554879 ETFBP38117 255 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 DRG2P55039 364 aaKnown RBP17■□□□□ 0.31
PCNX1-209ENST00000554879 SH3BGRP55822 239 aaPredicted RBP17■□□□□ 0.31
PCNX1-209ENST00000554879 SLC13A1Q9BZW2 595 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 ARHGAP42A6NI28 874 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 TGM2P21980 687 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 ALDH1A3P47895 512 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 IL9RQ01113 521 aa17■□□□□ 0.31
PCNX1-209ENST00000554879 MDM4O15151 490 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 USP12O75317 370 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 CCR1P32246 355 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 GDF10P55107 478 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 PITX1P78337 314 aaPredicted RBP16.99■□□□□ 0.31
PCNX1-209ENST00000554879 DUSP4Q13115 394 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 PLD5Q8N7P1 536 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 STK32AQ8WU08 396 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 PDCD6IPQ8WUM4 868 aaKnown RBP16.99■□□□□ 0.31
PCNX1-209ENST00000554879 PEBP4Q96S96 227 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 GRHL1Q9NZI5 618 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 ATXN10Q9UBB4 475 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 SF3B1O75533 1304 aaKnown RBP eCLIP16.99■□□□□ 0.31
PCNX1-209ENST00000554879 AGTP01019 485 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 ITGB1P05556 798 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 YWHAQP27348 245 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 HDAC4P56524 1084 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 KLHL38Q2WGJ6 581 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 C3orf58Q8NDZ4 430 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 MPP4Q96JB8 637 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 MAGEB5Q9BZ81 275 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 SMPD4Q9NXE4 827 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 DICER1Q9UPY3 1922 aaKnown RBP16.99■□□□□ 0.31
PCNX1-209ENST00000554879 SCN4AP35499 1836 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 NRP1O14786 923 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 PDE5AO76074 875 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 STAU1O95793 577 aaKnown RBP16.99■□□□□ 0.31
PCNX1-209ENST00000554879 CCL5P13501 91 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 LRPAP1P30533 357 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 ELK3P41970 407 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 UBR7Q8N806 425 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 TTC17Q96AE7 1141 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 LRRC37BQ96QE4 947 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 ACBD6Q9BR61 282 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 NDEL1Q9GZM8 345 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 TRABDQ9H4I3 376 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 ERCC2P18074 760 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 SLC25A11Q02978 314 aaKnown RBP16.99■□□□□ 0.31
PCNX1-209ENST00000554879 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
PCNX1-209ENST00000554879 RCN1Q15293 331 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 IPMKQ8NFU5 416 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 HTR3CQ8WXA8 447 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 CSPG4P5Q96PW8 444 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 PRDM12Q9H4Q4 367 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 SMYD2Q9NRG4 433 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 ADAM28Q9UKQ2 775 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 VANGL2Q9ULK5 521 aa16.99■□□□□ 0.31
PCNX1-209ENST00000554879 DRG1Q9Y295 367 aaKnown RBP16.99■□□□□ 0.31
PCNX1-209ENST00000554879 IQANK1A0A1B0GTG1 560 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 H7C4K7 107 aa16.98■□□□□ 0.31
PCNX1-209ENST00000554879 PMPCBO75439 489 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms