RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 PPP1R36Q96LQ0 422 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 FAM193BQ96PV7 902 aaPredicted RBP3.99□□□□□ -1.77
KTN1-217ENST00000554831 CSPG4P5Q96PW8 444 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 GCNAQ96QF7 691 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 SLC9A7Q96T83 725 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 ECSITQ9BQ95 431 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 SLC25A23Q9BV35 468 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 C6orf203Q9P0P8 240 aaPredicted RBP3.99□□□□□ -1.77
KTN1-217ENST00000554831 SIRPGQ9P1W8 387 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 WARS2Q9UGM6 360 aaKnown RBP3.99□□□□□ -1.77
KTN1-217ENST00000554831 FBXO5Q9UKT4 447 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 AURKCQ9UQB9 309 aa3.99□□□□□ -1.77
KTN1-217ENST00000554831 FARP1Q9Y4F1 1045 aaPredicted RBP3.99□□□□□ -1.77
KTN1-217ENST00000554831 E2F8A0AVK6 867 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 TPST1O60507 370 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 MOCS2O96007 188 aaPredicted RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 HOXC6P09630 235 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 TCF4P15884 667 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 PRKCHP24723 683 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ACAT1P24752 427 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 PPARGP37231 505 aaPredicted RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 CD151P48509 253 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 RPL14P50914 215 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 SLC10A6Q3KNW5 377 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 CELF3Q5SZQ8 465 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 CES3Q6UWW8 571 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 FAM183BPQ6ZVS7 135 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 LCA5Q86VQ0 697 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 PABPC5Q96DU9 382 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 GATA5Q9BWX5 397 aaPredicted RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 CEP41Q9BYV8 373 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ELOVL4Q9GZR5 314 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ABHD16BQ9H3Z7 469 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ELP3Q9H9T3 547 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 RBM22Q9NW64 420 aaKnown RBP eCLIP3.98□□□□□ -1.77
KTN1-217ENST00000554831 CLIC5Q9NZA1 410 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 PKD2L2Q9NZM6 624 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 COPG2Q9UBF2 871 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 SNX13Q9Y5W8 968 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 CNTNAP2Q9UHC6 1331 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 NUP205Q92621 2012 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 UBDO15205 165 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 RECQL4O94761 1208 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 HNRNPCP07910 306 aaKnown RBP eCLIP3.98□□□□□ -1.77
KTN1-217ENST00000554831 FAM58BPP0C7Q3 252 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ERVK-10P10266 1014 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 CYP2C18P33260 490 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 RENBPP51606 427 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 TKTL1P51854 596 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 RAP1GDS1P52306 607 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 CRADDP78560 199 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 MRPS22P82650 360 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 TMEM62Q0P6H9 643 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ILF2Q12905 390 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 MSLNQ13421 630 aaPredicted RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 PRKD1Q15139 912 aaPredicted RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 AMHR2Q16671 573 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 SAMD4BQ5PRF9 694 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 TCHHL1Q5QJ38 904 aaPredicted RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 SCARA3Q6AZY7 606 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 MRNIPQ6NTE8 343 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 PMF1Q6P1K2 205 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 POTEHQ6S545 545 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 LAYNQ6UX15 382 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 CYS1Q717R9 158 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ALYREFQ86V81 257 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 KCNMB4Q86W47 210 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 RP9Q8TA86 221 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 USP33Q8TEY7 942 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 GDPD5Q8WTR4 605 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 EXT2Q93063 718 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ZFRQ96KR1 1074 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 SIGLEC10Q96LC7 697 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ZNF570Q96NI8 536 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ZBTB18Q99592 522 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 RHOJQ9H4E5 214 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 BLOC1S6Q9UL45 172 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ANGPTL3Q9Y5C1 460 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ZNF541Q9H0D2 1346 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 CACNA1CQ13936 2221 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 GCATO75600 419 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 LTFP02788 710 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 PYGLP06737 847 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 HSPA1AP0DMV8 641 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 HSPA1BP0DMV9 641 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 RAG1P15918 1043 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 TTKP33981 857 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ATXN3P54252 364 aaPredicted RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 PPIDQ08752 370 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 ADIGQ0VDE8 80 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 TMED1Q13445 227 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 PCBP1Q15365 356 aaKnown RBP eCLIP3.98□□□□□ -1.77
KTN1-217ENST00000554831 MSS51Q4VC12 460 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 TLDC1Q6P9B6 456 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 EFL1Q7Z2Z2 1120 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 CMC1Q7Z7K0 106 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 TMEM110Q86TL2 294 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 ABI1Q8IZP0 508 aa3.98□□□□□ -1.77
KTN1-217ENST00000554831 TDRD5Q8NAT2 981 aaKnown RBP3.98□□□□□ -1.77
KTN1-217ENST00000554831 SHCBP1Q8NEM2 672 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms