RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ADAM29Q9UKF5 820 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 NDRG2Q9UN36 371 aaKnown RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 IPPQ9Y573 584 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 RBM8AQ9Y5S9 174 aaKnown RBP5.35□□□□□ -1.55
ATXN3-228ENST00000554592 ATRXP46100 2492 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 CACNA1IQ9P0X4 2223 aa5.35□□□□□ -1.55
ATXN3-228ENST00000554592 SF3B1O75533 1304 aaKnown RBP eCLIP5.34□□□□□ -1.554e-12■■■■■ 275.7
ATXN3-228ENST00000554592 PRSS38A1L453 326 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 TMEM150BA6NC51 233 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 TSPAN6O43657 245 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PCDHGA12O60330 932 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 DKC1O60832 514 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PSMD10O75832 226 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PRPF6O94906 941 aaKnown RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PAPSS2O95340 614 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 CYP1A1P04798 512 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 CHRNB1P11230 501 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PTPN2P17706 415 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 HOXA6P31267 233 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 MLH1P40692 756 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 GLRBP48167 497 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 MANFP55145 182 aaKnown RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PSMC5P62195 406 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 SATB1Q01826 763 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 SLC6A3Q01959 620 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ALDH6A1Q02252 535 aaKnown RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 LAMTOR4Q0VGL1 99 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ELAVL2Q12926 359 aaKnown RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 NFATC3Q12968 1075 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PIN1Q13526 163 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PPP2R5AQ15172 486 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PSMD5Q16401 504 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PFKFB3Q16875 520 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 FAM171A1Q5VUB5 890 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 LRCH2Q5VUJ6 765 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 NOTUMQ6P988 496 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 C1orf228Q6PIY5 440 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ESPNLQ6ZVH7 1005 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ANO5Q75V66 913 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 CEP57Q86XR8 500 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 STPG3Q8N7X2 389 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 BICD2Q8TD16 824 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 TCP11Q8WWU5 503 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PSPC1Q8WXF1 523 aaKnown RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 CCDC136Q96JN2 1154 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ACAP3Q96P50 834 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 SH2D3AQ9BRG2 576 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 EIF2AQ9BY44 585 aaKnown RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 TRIM6Q9C030 488 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 CSRNP2Q9H175 543 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ARRDC1-AS1Q9H2J1 176 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 MINDY3Q9H8M7 445 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ZFP14Q9HCL3 533 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ZNF334Q9HCZ1 680 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 CCM2LQ9NUG4 571 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 HCFC1R1Q9NWW0 138 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ZIM2Q9NZV7 527 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 ARHGAP20Q9P2F6 1191 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PCDHGA9Q9Y5G4 932 aaKnown RBP5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PCDHGA8Q9Y5G5 932 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PCDHGA7Q9Y5G6 932 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PCDHGA6Q9Y5G7 932 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.55
ATXN3-228ENST00000554592 BAZ2BQ9UIF8 2168 aaKnown RBP5.33□□□□□ -1.56
ATXN3-228ENST00000554592 CCDC196A0A1B0GTZ2 297 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ZNF197O14709 1029 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ZNF263O14978 683 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ADAM12O43184 909 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ZBTB43O43298 467 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 EDIL3O43854 480 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 TSPAN1O60635 241 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ERLIN2O94905 339 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ABLIM3O94929 683 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 APOL3O95236 402 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 SCGB1D2O95969 90 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 IGHDP01880 384 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 RHOP08100 348 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 PSMC3P17980 439 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ENPP1P22413 925 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 GDI1P31150 447 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 OR1D2P34982 312 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 PTENP60484 403 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 KRT85P78386 507 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 POU5F1BQ06416 359 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 GRIK3Q13003 919 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 SRSF5Q13243 272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ODF1Q14990 250 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 SF3A2Q15428 464 aaKnown RBP5.33□□□□□ -1.56
ATXN3-228ENST00000554592 Q4G0T1 1027 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 CT83Q5H943 113 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 PITRM1Q5JRX3 1037 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 FAM78AQ5JUQ0 283 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 TTC22Q5TAA0 569 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 PRAMEF9Q5VWM5 478 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 SLFN12LQ6IEE8 588 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 TIGD7Q6NT04 549 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-228ENST00000554592 BORAQ6PGQ7 559 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 APOA5Q6Q788 366 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 B3GNT9Q6UX72 402 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms