RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 FSBPO95073 299 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 ASLP04424 464 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 ATXN1LP0C7T5 689 aaKnown RBP22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 PPP1R2P41236 205 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 CSKP41240 450 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 CETN1Q12798 172 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 ARID5BQ14865 1188 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 HNRNPA1L2Q32P51 320 aaKnown RBP22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 TTI2Q6NXR4 508 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 RRAGAQ7L523 313 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 TMPRSS7Q7RTY8 843 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 ARHGEF19Q8IW93 802 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 KDM1BQ8NB78 822 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 IGSF8Q969P0 613 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 PABPC3Q9H361 631 aaKnown RBP22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 BTBD3Q9Y2F9 522 aa22.5■■□□□ 1.19
SMARCC2-210ENST00000550519 TYW5A2RUC4 315 aaKnown RBP22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 IGHV4-34P06331 123 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 HOXB3P14651 431 aaPredicted RBP22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 GPD2P43304 727 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 ST8SIA6P61647 398 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 FSCBQ5H9T9 825 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 MS4A13Q5J8X5 152 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 KCNT1Q5JUK3 1230 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 KIAA0895LQ68EN5 471 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 ISM2Q6H9L7 571 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 FOXR2Q6PJQ5 311 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 LAYNQ6UX15 382 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 SCUBE3Q8IX30 993 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 ELOA2Q8IYF1 753 aaPredicted RBP22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 EHBP1Q8NDI1 1231 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 NUCKS1Q9H1E3 243 aaKnown RBP22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 CCDC86Q9H6F5 360 aaKnown RBP22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 MAN1B1Q9UKM7 699 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 CNTN6Q9UQ52 1028 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 NAALADL1Q9UQQ1 740 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 NCKAP1Q9Y2A7 1128 aa22.49■■□□□ 1.19
SMARCC2-210ENST00000550519 ITPR1Q14643 2758 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 KCNK3O14649 394 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 SART1O43290 800 aaKnown RBP22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 PCDHGA12O60330 932 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 SIN3BO75182 1162 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 CTSKP43235 329 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 BEND5Q7L4P6 421 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 CARNMT1Q8N4J0 409 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 KREMEN1Q96MU8 473 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 FBXL12Q9NXK8 326 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 SERGEFQ9UGK8 458 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 PLXNB3Q9ULL4 1909 aa22.48■■□□□ 1.19
SMARCC2-210ENST00000550519 H0Y8X5 98 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 BMP6P22004 513 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 GRK6P43250 576 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 CCT8P50990 548 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 GALCP54803 685 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 RACK1P63244 317 aaKnown RBP22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 CDH18Q13634 790 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 DCAF6Q58WW2 860 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 PITRM1Q5JRX3 1037 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 C9orf64Q5T6V5 341 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 SYPL2Q5VXT5 272 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 MMS22LQ6ZRQ5 1243 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 TRIM59Q8IWR1 403 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 DHX40Q8IX18 779 aaKnown RBP22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 CFAP52Q8N1V2 620 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 FAM149B1Q96BN6 582 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 ST7Q9NRC1 585 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 XPO7Q9UIA9 1087 aaKnown RBP22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 ERVW-1Q9UQF0 538 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 GPSM3Q9Y4H4 160 aa22.47■■□□□ 1.19
SMARCC2-210ENST00000550519 A0A1W2PPC4 97 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 TARSL2A2RTX5 802 aaKnown RBP22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 C10orf142B7Z368 130 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 PPP1R3GB7ZBB8 358 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 PAPSS1O43252 624 aaPredicted RBP22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 TNFSF14O43557 240 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 RNASEH1O60930 286 aaKnown RBP22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 LUC7L3O95232 432 aaKnown RBP22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 SRPRAP08240 638 aaKnown RBP22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 ACADSBP45954 432 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 KCNH2Q12809 1159 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 SFSWAPQ12872 951 aaKnown RBP22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 CST6Q15828 149 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 KLHL10Q6JEL2 608 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 TAC4Q86UU9 113 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 CCDC117Q8IWD4 279 aaPredicted RBP22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 ADAM32Q8TC27 787 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 GANCQ8TET4 914 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 STK32AQ8WU08 396 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 SLC4A5Q9BY07 1137 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 NBEAQ8NFP9 2946 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 APC2O95996 2303 aa22.46■■□□□ 1.19
SMARCC2-210ENST00000550519 ACACAQ13085 2346 aa22.45■■□□□ 1.18
SMARCC2-210ENST00000550519 TTC34A8MYJ7 566 aa22.45■■□□□ 1.18
SMARCC2-210ENST00000550519 VILLO15195 856 aa22.45■■□□□ 1.18
SMARCC2-210ENST00000550519 MID1O15344 667 aa22.45■■□□□ 1.18
SMARCC2-210ENST00000550519 DFNA5O60443 496 aa22.45■■□□□ 1.18
SMARCC2-210ENST00000550519 MOCS2O96007 188 aaPredicted RBP22.45■■□□□ 1.18
SMARCC2-210ENST00000550519 CTSOP43234 321 aaPredicted RBP22.45■■□□□ 1.18
SMARCC2-210ENST00000550519 MEA1Q16626 185 aa22.45■■□□□ 1.18
SMARCC2-210ENST00000550519 DENND1BQ6P3S1 775 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms