RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 GJB6O95452 261 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 GSTM1P09488 218 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 KRT10P13645 584 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 H2AFXP16104 143 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 DPP6P42658 865 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 TNNT3P45378 269 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 RARRES1P49788 294 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 EPHB3P54753 998 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 CLDN6P56747 220 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 BNC1Q01954 994 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 PLD1Q13393 1074 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 PKP1Q13835 747 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 PTPAQ15257 358 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 SMAD1Q15797 465 aaKnown RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 ZNF77Q15935 545 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 DDR2Q16832 855 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 TPD52L1Q16890 204 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 ARHGAP15Q53QZ3 475 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 MOXD1Q6UVY6 613 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 ZPBP2Q6X784 338 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 TTC30AQ86WT1 665 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 SPPL2CQ8IUH8 684 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 ARHGEF39Q8N4T4 335 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 ALLCQ8N6M5 410 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 CELF2-AS1Q8N7Q2 184 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 IL17RCQ8NAC3 791 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 CCDC150Q8NCX0 1101 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 STKLD1Q8NE28 680 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 CEP76Q8TAP6 659 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 GOLGA5Q8TBA6 731 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 SREK1Q8WXA9 508 aaKnown RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 HAS1Q92839 578 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 PPP1R14AQ96A00 147 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 EXOC4Q96A65 974 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 KIFC3Q9BVG8 833 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 CDADC1Q9BWV3 514 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 LSG1Q9H089 658 aaKnown RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 NAT10Q9H0A0 1025 aaKnown RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 THG1LQ9NWX6 298 aaKnown RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 SMC3Q9UQE7 1217 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 BTBD3Q9Y2F9 522 aa7.09□□□□□ -1.27
CCDC60-205ENST00000546345 TIMM13Q9Y5L4 95 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-205ENST00000546345 NBASA2RRP1 2371 aa7.09□□□□□ -1.28
CCDC60-205ENST00000546345 PHLPP2Q6ZVD8 1323 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 IGHV1OR15-9A0A0B4J2B8 117 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 KLF18A0A0U1RQI7 1052 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 B8ZZF3 427 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 GOLGA6L19H0YKK7 550 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 M0QZQ0 153 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 PLK4O00444 970 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 ABLIM1O14639 778 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CAPN9O14815 690 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 USO1O60763 962 aaKnown RBP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 KRT38O76015 456 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 OAZ2O95190 189 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 HPXP02790 462 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 GNA11P29992 359 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 KIR2DL1P43626 348 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 AARSP49588 968 aaKnown RBP eCLIP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CDR1P51861 262 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 TLE3Q04726 772 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CHRNEQ04844 493 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 ZNF33AQ06730 810 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 MYO1EQ12965 1108 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 GPR17Q13304 367 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 PRPF4BQ13523 1007 aaKnown RBP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 MTF1Q14872 753 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 PDGFRLQ15198 375 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 EPHA7Q15375 998 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 NTRK3Q16288 839 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 DCAF4L1Q3SXM0 396 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 SV2CQ496J9 727 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 COLEC12Q5KU26 742 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 NT5DC1Q5TFE4 455 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 POMZP3Q6PJE2 187 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 GPR155Q7Z3F1 870 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CPA6Q8N4T0 437 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 ZNF513Q8N8E2 541 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 ANKS4BQ8N8V4 417 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 MAB21L3Q8N8X9 362 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 TXNDC5Q8NBS9 432 aaKnown RBP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 MNS1Q8NEH6 495 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 OR10T2Q8NGX3 314 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CCDC12Q8WUD4 166 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 HMGB4Q8WW32 186 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 SLC22A12Q96S37 553 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 SLC12A9Q9BXP2 914 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CDT1Q9H211 546 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 KIF9Q9HAQ2 790 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CD248Q9HCU0 757 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 AP5S1Q9NUS5 200 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 APEX2Q9UBZ4 518 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CGGBP1Q9UFW8 167 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 TUBGCP4Q9UGJ1 667 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 DDX25Q9UHL0 483 aaKnown RBP7.08□□□□□ -1.28
CCDC60-205ENST00000546345 ASB3Q9Y575 518 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CREBBPQ92793 2442 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 ABCA12Q86UK0 2595 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 CACNA1DQ01668 2161 aa7.08□□□□□ -1.28
CCDC60-205ENST00000546345 DOCK9Q9BZ29 2069 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms