RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 EXOC4Q96A65 974 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 PNKPQ96T60 521 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 MFSD1Q9H3U5 465 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 GOLPH3Q9H4A6 298 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 DHX35Q9H5Z1 703 aaKnown RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 FBRSL1Q9HCM7 1045 aaKnown RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 DEC1Q9P2X7 70 aa14.06□□□□□ -0.16
SP140-213ENST00000543928 NDRG2Q9UN36 371 aaKnown RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 MRPS17Q9Y2R5 130 aaKnown RBP14.06□□□□□ -0.16
SP140-213ENST00000543928 MIA3Q5JRA6 1907 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 IGLV3-10A0A075B6K4 115 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 A0A1B0GVM2 712 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 TCAF2A6NFQ2 919 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 DRGXA6NNA5 263 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 CREB3O43889 395 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 CNTN5O94779 1100 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 LRIG2O94898 1065 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 LUC7L3O95232 432 aaKnown RBP14.05□□□□□ -0.16
SP140-213ENST00000543928 CISD3P0C7P0 127 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 RARAP10276 462 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 COMTP21964 271 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 TARSP26639 723 aaKnown RBP14.05□□□□□ -0.16
SP140-213ENST00000543928 L1CAMP32004 1257 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 GJC1P36383 396 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 SLC1A1P43005 524 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 DGKGP49619 791 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 MESP2Q0VG99 397 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 UBXN2BQ14CS0 331 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 ALFQ53S48 1182 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 TMEM196Q5HYL7 178 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 MANEALQ5VSG8 457 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 C11orf63Q6NUN7 778 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 RWDD4Q6NW29 188 aaKnown RBP14.05□□□□□ -0.16
SP140-213ENST00000543928 PSTKQ8IV42 348 aaKnown RBP14.05□□□□□ -0.16
SP140-213ENST00000543928 MFN1Q8IWA4 741 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 CCAR2Q8N163 923 aaKnown RBP14.05□□□□□ -0.16
SP140-213ENST00000543928 PHTF2Q8N3S3 785 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 CARNMT1Q8N4J0 409 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 FLCNQ8NFG4 579 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 WFDC5Q8TCV5 224 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 HSPH1Q92598 858 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 CALR3Q96L12 384 aaKnown RBP14.05□□□□□ -0.16
SP140-213ENST00000543928 KCTD15Q96SI1 283 aaPredicted RBP14.05□□□□□ -0.16
SP140-213ENST00000543928 EPAS1Q99814 870 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 SLC2A11Q9BYW1 496 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 TSGA10Q9BZW7 698 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 FOXQ1Q9C009 403 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 ZYG11BQ9C0D3 744 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 LTB4R2Q9NPC1 389 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 ARHGEF4Q9NR80 690 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 MPP6Q9NZW5 540 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 FBXO10Q9UK96 956 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 PPP2R2CQ9Y2T4 447 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 HYOU1Q9Y4L1 999 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 CUL9Q8IWT3 2517 aa14.05□□□□□ -0.16
SP140-213ENST00000543928 KIAA1549LQ6ZVL6 1849 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 H0Y626 953 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 KRT86O43790 486 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 SPOPO43791 374 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 KAT7O95251 611 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 MOCS3O95396 460 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 APODP05090 189 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 CDH4P55283 916 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 GRSF1Q12849 480 aaKnown RBP eCLIP14.04□□□□□ -0.16
SP140-213ENST00000543928 SEMA3BQ13214 749 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 CDH18Q13634 790 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 IFI16Q16666 785 aaKnown RBP14.04□□□□□ -0.16
SP140-213ENST00000543928 PPP6R3Q5H9R7 873 aaPredicted RBP14.04□□□□□ -0.16
SP140-213ENST00000543928 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
SP140-213ENST00000543928 FSTL4Q6MZW2 842 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 CHST9Q7L1S5 443 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 DAAM2Q86T65 1068 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 CCDC117Q8IWD4 279 aaPredicted RBP14.04□□□□□ -0.16
SP140-213ENST00000543928 SUGP1Q8IWZ8 645 aaKnown RBP14.04□□□□□ -0.16
SP140-213ENST00000543928 TEKT4Q8WW24 435 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 TBC1D31Q96DN5 1066 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 NELL2Q99435 816 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.04□□□□□ -0.16
SP140-213ENST00000543928 PPARGC1AQ9UBK2 798 aaKnown RBP14.04□□□□□ -0.16
SP140-213ENST00000543928 GUCA1BQ9UMX6 200 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 MTF2Q9Y483 593 aaPredicted RBP14.04□□□□□ -0.16
SP140-213ENST00000543928 ALG6Q9Y672 507 aa14.04□□□□□ -0.16
SP140-213ENST00000543928 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.03□□□□□ -0.16
SP140-213ENST00000543928 GRID2IPA4D2P6 1211 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 FAM170BA6NMN3 283 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 EEF2KO00418 725 aaKnown RBP14.03□□□□□ -0.16
SP140-213ENST00000543928 CLDN11O75508 207 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 EGFP01133 1207 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 KRT7P08729 469 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 TNNT1P13805 278 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 DRD1P21728 446 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 EPHB2P29323 1055 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 HLA-FP30511 346 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 GRIA2P42262 883 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 TPI1P60174 286 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 ZNF177Q13360 481 aaPredicted RBP14.03□□□□□ -0.16
SP140-213ENST00000543928 DPYSL2Q16555 572 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 PREPLQ4J6C6 727 aaPredicted RBP14.03□□□□□ -0.16
SP140-213ENST00000543928 ATP13A4Q4VNC1 1196 aa14.03□□□□□ -0.16
SP140-213ENST00000543928 FSCBQ5H9T9 825 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms