RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 ADAMTS1Q9UHI8 967 aa19.35■□□□□ 0.69
LTBR-211ENST00000543190 KLK13Q9UKR3 277 aa19.35■□□□□ 0.69
LTBR-211ENST00000543190 INTS6Q9UL03 887 aaKnown RBP19.35■□□□□ 0.69
LTBR-211ENST00000543190 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.35■□□□□ 0.69
LTBR-211ENST00000543190 PLXNA2O75051 1894 aa19.35■□□□□ 0.69
LTBR-211ENST00000543190 TARSL2A2RTX5 802 aaKnown RBP19.34■□□□□ 0.69
LTBR-211ENST00000543190 TYW5A2RUC4 315 aaKnown RBP19.34■□□□□ 0.69
LTBR-211ENST00000543190 FLRT2O43155 660 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 TBL1XO60907 577 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 SEMA4FO95754 770 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 GLI1P08151 1106 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 SRPRAP08240 638 aaKnown RBP19.34■□□□□ 0.69
LTBR-211ENST00000543190 MTA1Q13330 715 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 ZNF776Q68DI1 518 aaPredicted RBP19.34■□□□□ 0.69
LTBR-211ENST00000543190 RRAGAQ7L523 313 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 SCUBE3Q8IX30 993 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 ERLEC1Q96DZ1 483 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 MRGPRX3Q96LB0 322 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 THAP9Q9H5L6 903 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 GAREM1Q9H706 876 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 TM7SF3Q9NS93 570 aa19.34■□□□□ 0.69
LTBR-211ENST00000543190 GTPBP10A4D1E9 387 aaKnown RBP19.33■□□□□ 0.68
LTBR-211ENST00000543190 MED7O43513 233 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 PCDHGA12O60330 932 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 DFNA5O60443 496 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 FGFR1OPO95684 399 aaKnown RBP19.33■□□□□ 0.68
LTBR-211ENST00000543190 DNTTP04053 509 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 FTH1P19P0C7X4 201 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 CD27P26842 260 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 YWHAZP63104 245 aaKnown RBP19.33■□□□□ 0.68
LTBR-211ENST00000543190 SLC12A1Q13621 1099 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 HLA-BQ31612 363 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 ZNF606Q8WXB4 792 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 FAM131CQ96AQ9 280 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 BIRC7Q96CA5 298 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 BTN2A3PQ96KV6 586 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 MED15Q96RN5 788 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 CDC6Q99741 560 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 INTS2Q9H0H0 1204 aaKnown RBP19.33■□□□□ 0.68
LTBR-211ENST00000543190 C6orf106Q9H6K1 298 aaPredicted RBP19.33■□□□□ 0.68
LTBR-211ENST00000543190 POPDC2Q9HBU9 364 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 ASNSD1Q9NWL6 643 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 FZD4Q9ULV1 537 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 APOBEC2Q9Y235 224 aaKnown RBP19.33■□□□□ 0.68
LTBR-211ENST00000543190 PCDHB9Q9Y5E1 797 aa19.33■□□□□ 0.68
LTBR-211ENST00000543190 ITPR1Q14643 2758 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 DOCK4Q8N1I0 1966 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 GOLGA6L7A0A1B0GV03 622 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 LUC7L3O95232 432 aaKnown RBP19.32■□□□□ 0.68
LTBR-211ENST00000543190 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
LTBR-211ENST00000543190 PLK1P53350 603 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 RPS24P62847 133 aaKnown RBP19.32■□□□□ 0.68
LTBR-211ENST00000543190 TEAD4Q15561 434 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 KLHL10Q6JEL2 608 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 TRIM65Q6PJ69 517 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 IGSF8Q969P0 613 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 PABPC3Q9H361 631 aaKnown RBP19.32■□□□□ 0.68
LTBR-211ENST00000543190 NAALADL1Q9UQQ1 740 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 FNDC3AQ9Y2H6 1198 aaKnown RBP19.32■□□□□ 0.68
LTBR-211ENST00000543190 LAMA5O15230 3695 aa19.32■□□□□ 0.68
LTBR-211ENST00000543190 SRRM3A6NNA2 597 aaPredicted RBP19.31■□□□□ 0.68
LTBR-211ENST00000543190 SLC2A3P11169 496 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 CSKP41240 450 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 ST8SIA6P61647 398 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 TTC39BQ5VTQ0 682 aaPredicted RBP19.31■□□□□ 0.68
LTBR-211ENST00000543190 SYPL2Q5VXT5 272 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 ISM2Q6H9L7 571 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 CHCHD4Q8N4Q1 142 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 ZCCHC14Q8WYQ9 949 aaKnown RBP19.31■□□□□ 0.68
LTBR-211ENST00000543190 CAMK1GQ96NX5 476 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 PRMT1Q99873 361 aaKnown RBP19.31■□□□□ 0.68
LTBR-211ENST00000543190 SRRTQ9BXP5 876 aaKnown RBP19.31■□□□□ 0.68
LTBR-211ENST00000543190 NUCKS1Q9H1E3 243 aaKnown RBP19.31■□□□□ 0.68
LTBR-211ENST00000543190 MIR1-1HGQ9H1L0 117 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 TM9SF3Q9HD45 589 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.31■□□□□ 0.68
LTBR-211ENST00000543190 DKK4Q9UBT3 224 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 CYTH4Q9UIA0 394 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 PCDHGC3Q9UN70 934 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 CTNND2Q9UQB3 1225 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 NBEAQ8NFP9 2946 aa19.31■□□□□ 0.68
LTBR-211ENST00000543190 DOCK9Q9BZ29 2069 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 KCNU1A8MYU2 1149 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 TRUB2O95900 331 aaKnown RBP19.3■□□□□ 0.68
LTBR-211ENST00000543190 IGHV4-34P06331 123 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 CSNK1EP49674 416 aaKnown RBP19.3■□□□□ 0.68
LTBR-211ENST00000543190 RACK1P63244 317 aaKnown RBP19.3■□□□□ 0.68
LTBR-211ENST00000543190 CDH18Q13634 790 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 SUZ12Q15022 739 aaKnown RBP19.3■□□□□ 0.68
LTBR-211ENST00000543190 DCAF6Q58WW2 860 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 PITRM1Q5JRX3 1037 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 C9orf64Q5T6V5 341 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 CCNI2Q6ZMN8 369 aaPredicted RBP19.3■□□□□ 0.68
LTBR-211ENST00000543190 TAC4Q86UU9 113 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 ZNF366Q8N895 744 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 SHC3Q92529 594 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 FAM149B1Q96BN6 582 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 MYEOVQ96EZ4 313 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 MIS12Q9H081 205 aa19.3■□□□□ 0.68
LTBR-211ENST00000543190 IL21RQ9HBE5 538 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms