RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 STOML2Q9UJZ1 356 aa11□□□□□ -0.65
DDB1-221ENST00000543162 NEU3Q9UQ49 428 aa11□□□□□ -0.65
DDB1-221ENST00000543162 CCL26Q9Y258 94 aa11□□□□□ -0.65
DDB1-221ENST00000543162 DRGXA6NNA5 263 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 EFCAB8A8MWE9 144 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 TRDMT1O14717 391 aaKnown RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 MCF2LO15068 1137 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 LIASO43766 372 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 TSPAN3O60637 253 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 TCF3P15923 654 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 RHOQP17081 205 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 SERPINB6P35237 376 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 NR2C2P49116 596 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 FNTAP49354 379 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 EIF3EP60228 445 aaKnown RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 TUBB4BP68371 445 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 GBE1Q04446 702 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 USP4Q13107 963 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 PAFAH1B3Q15102 231 aaKnown RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 NOMO1Q15155 1222 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 FAM78AQ5JUQ0 283 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 TEX35Q5T0J7 233 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 ARTNQ5T4W7 220 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 CCDC70Q6NSX1 233 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 POTEHQ6S545 545 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 Q7L0L9 218 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 BZW1Q7L1Q6 419 aaKnown RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 BBS7Q8IWZ6 715 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 MMGT1Q8N4V1 131 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 CELF5Q8N6W0 485 aaKnown RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 RTL3Q8N8U3 475 aaKnown RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 C12orf50Q8NA57 414 aaPredicted RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 NOA1Q8NC60 698 aaKnown RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 SMARCD2Q92925 531 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 IGSF8Q969P0 613 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 RUNDC3BQ96NL0 473 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 CDX2Q99626 313 aaPredicted RBP10.99□□□□□ -0.65
DDB1-221ENST00000543162 LRRC19Q9H756 370 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 CD207Q9UJ71 328 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 CDH7Q9ULB5 785 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 MFHAS1Q9Y4C4 1052 aa10.99□□□□□ -0.65
DDB1-221ENST00000543162 NUP210Q8TEM1 1887 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 TYW5A2RUC4 315 aaKnown RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 WASH4PA8MWX3 477 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 H7C0C1 242 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 MFSD11O43934 449 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 CNTN5O94779 1100 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 CHKAP35790 457 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 COILP38432 576 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 ATP5OP48047 213 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 IRAK1P51617 712 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 VCPP55072 806 aaKnown RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 RPS24P62847 133 aaKnown RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 BYSLQ13895 437 aaKnown RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 CCDC85BQ15834 202 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 ZNF77Q15935 545 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 C5orf22Q49AR2 442 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 ALFQ53S48 1182 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 TTC39BQ5VTQ0 682 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 C8orf74Q6P047 294 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 TTC27Q6P3X3 843 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 DRICH1Q6PGQ1 229 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 CCDC137Q6PK04 289 aaKnown RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 TFAP2DQ7Z6R9 452 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 FAM217AQ8IXS0 508 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 CCDC105Q8IYK2 499 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 CFAP52Q8N1V2 620 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 CPXM2Q8N436 756 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 LZTR1Q8N653 840 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 TDRD5Q8NAT2 981 aaKnown RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 HJURPQ8NCD3 748 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 SMRP1Q8NCR6 262 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 CCDC26Q8TAB7 109 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 SLC35B2Q8TB61 432 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 NKD2Q969F2 451 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 MYEOVQ96EZ4 313 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 CCDC114Q96M63 670 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 PRICKLE1Q96MT3 831 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 ASB16Q96NS5 453 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 NECTIN4Q96NY8 510 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 RETREG1Q9H6L5 497 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 TMEM248Q9NWD8 314 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 DTLQ9NZJ0 730 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 TBC1D14Q9P2M4 693 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 FEZ2Q9UHY8 353 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 DNPEPQ9ULA0 475 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 ZNF148Q9UQR1 794 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 RAD54BQ9Y620 910 aa10.98□□□□□ -0.65
DDB1-221ENST00000543162 ZFP37Q9Y6Q3 630 aaPredicted RBP10.98□□□□□ -0.65
DDB1-221ENST00000543162 SLC9A3R1O14745 358 aaPredicted RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 NCAM2O15394 837 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 CLDN11O75508 207 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 MAP3K6O95382 1288 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 RBP3P10745 1247 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 FOSL2P15408 326 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 MX2P20592 715 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 GBP2P32456 591 aaPredicted RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 VIPR2P41587 438 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 KCNJ1P48048 391 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 MAPKAPK2P49137 400 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms