RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 MROH7Q68CQ1 1323 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 ATP5BP06576 529 aaKnown RBP10.96□□□□□ -0.66
GABRB3-204ENST00000541819 RCVRNP35243 200 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 TRAF3Q13114 568 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 RASA2Q15283 850 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 SPANXN3Q5MJ09 141 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 FBXO47Q5MNV8 452 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 DHFR2Q86XF0 187 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 CYP4X1Q8N118 509 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 UBASH3BQ8TF42 649 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 SMARCD1Q96GM5 515 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 TBL1YQ9BQ87 522 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 COMMD9Q9P000 198 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 LIMD1Q9UGP4 676 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 TNFSF13BQ9Y275 285 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 SLC25A12O75746 678 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 EPN2O95208 641 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 DPEP1P16444 411 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 RBBP4Q09028 425 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 POU6F1Q14863 301 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 DGUOKQ16854 277 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 CDH24Q86UP0 819 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 MID1IP1Q9NPA3 183 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 UBAP1Q9NZ09 502 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 AP3M1Q9Y2T2 418 aa10.96□□□□□ -0.66
GABRB3-204ENST00000541819 A0A0A6YYK5 440 aaPredicted RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 CARNS1A5YM72 827 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 PQBP1O60828 265 aaKnown RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 CLPTM1O96005 669 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 LTFP02788 710 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 FAM58BPP0C7Q3 252 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 PGAM1P18669 254 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 HK2P52789 917 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 MARSP56192 900 aaKnown RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 INSCQ1MX18 579 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 TSGA10IPQ3SY00 556 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 AKIRIN2Q53H80 203 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 FBXL19Q6PCT2 694 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 KYQ8NBH2 561 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ATG4AQ8WYN0 398 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 PHF21BQ96EK2 531 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 PABPC3Q9H361 631 aaKnown RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 NEUROD4Q9HD90 331 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ADARB2Q9NS39 739 aaKnown RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 UBP1Q9NZI7 540 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 CNTNAP5Q8WYK1 1306 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 TRIM66O15016 1216 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 COX7A2P14406 83 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 CYP11B1P15538 503 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 BGNP21810 368 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ACADLP28330 430 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 KCNMB4Q86W47 210 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 LGI2Q8N0V4 545 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 IGDCC4Q8TDY8 1250 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 RORBQ92753 470 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 REXO5Q96IC2 774 aaKnown RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 RBM7Q9Y580 266 aaKnown RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 PRR36Q9H6K5 1346 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 O00370 1275 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 GSSP48637 474 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 SLC1A6P48664 564 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ZFP28Q8NHY6 868 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 RXFP2Q8WXD0 754 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 CASKIN2Q8WXE0 1202 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ZKSCAN4Q969J2 545 aaPredicted RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 IRX2Q9BZI1 471 aaPredicted RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 SLC24A2Q9UI40 661 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ZMYM5Q9UJ78 669 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 KPNA3O00505 521 aaPredicted RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 KPNA4O00629 521 aaPredicted RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 PHGDHO43175 533 aaKnown RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 POMCP01189 267 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 PLEKP08567 350 aaPredicted RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 IGFBP4P22692 258 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 PON1P27169 355 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ARHGDIBP52566 201 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 KDM7AQ6ZMT4 941 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 TFAP2DQ7Z6R9 452 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ZDHHC17Q8IUH5 632 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ULK2Q8IYT8 1036 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 UBE2E3Q969T4 207 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 ELL3Q9HB65 397 aaPredicted RBP10.95□□□□□ -0.66
GABRB3-204ENST00000541819 TMEM51Q9NW97 253 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 GSTK1Q9Y2Q3 226 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 LYVE1Q9Y5Y7 322 aa10.95□□□□□ -0.66
GABRB3-204ENST00000541819 LDLRP01130 860 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 CXCR2P25025 360 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 TUBP50607 506 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 FASTKQ14296 549 aaKnown RBP10.94□□□□□ -0.66
GABRB3-204ENST00000541819 CRY1Q16526 586 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 ARMC12Q5T9G4 340 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 FAM171A1Q5VUB5 890 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 SMYD1Q8NB12 490 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 CELF6Q96J87 481 aaKnown RBP10.94□□□□□ -0.66
GABRB3-204ENST00000541819 CPNE1Q99829 537 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 ZDHHC6Q9H6R6 413 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 GBA2Q9HCG7 927 aaPredicted RBP10.94□□□□□ -0.66
GABRB3-204ENST00000541819 PSME2Q9UL46 239 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 MAP3K4Q9Y6R4 1608 aa10.94□□□□□ -0.66
GABRB3-204ENST00000541819 NRKQ7Z2Y5 1582 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms