RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 ADAM32Q8TC27 787 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 RHBDD1Q8TEB9 315 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 GOLGA1Q92805 767 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 SLC39A13Q96H72 371 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 KREMEN1Q96MU8 473 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 TIGD1Q96MW7 591 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 IRX2Q9BZI1 471 aaPredicted RBP16.85■□□□□ 0.29
TRIM65-203ENST00000540812 SGK2Q9HBY8 427 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 SERGEFQ9UGK8 458 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 XPO7Q9UIA9 1087 aaKnown RBP16.85■□□□□ 0.29
TRIM65-203ENST00000540812 LHX6Q9UPM6 363 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 NAALADL1Q9UQQ1 740 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 ACACAQ13085 2346 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 FLRT2O43155 660 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 SIN3BO75182 1162 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 MOCS2O96007 188 aaPredicted RBP16.84■□□□□ 0.29
TRIM65-203ENST00000540812 IGHV4-34P06331 123 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 BMP6P22004 513 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 CD27P26842 260 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 CTSOP43234 321 aaPredicted RBP16.84■□□□□ 0.29
TRIM65-203ENST00000540812 GRIA4P48058 902 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 RPL34P49207 117 aaKnown RBP16.84■□□□□ 0.29
TRIM65-203ENST00000540812 STIM1Q13586 685 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 TEAD4Q15561 434 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 MS4A13Q5J8X5 152 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 DENND1BQ6P3S1 775 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 TAC4Q86UU9 113 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 DHX40Q8IX18 779 aaKnown RBP16.84■□□□□ 0.29
TRIM65-203ENST00000540812 SCUBE3Q8IX30 993 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 NELFBQ8WX92 580 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 GTPBP4Q9BZE4 634 aaKnown RBP16.84■□□□□ 0.29
TRIM65-203ENST00000540812 RSPH9Q9H1X1 276 aaPredicted RBP16.84■□□□□ 0.29
TRIM65-203ENST00000540812 PABPC3Q9H361 631 aaKnown RBP16.84■□□□□ 0.29
TRIM65-203ENST00000540812 OSGEPQ9NPF4 335 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 KIAA1522Q9P206 1035 aaPredicted RBP16.84■□□□□ 0.29
TRIM65-203ENST00000540812 LOC400499M0QZD8 3231 aa16.84■□□□□ 0.29
TRIM65-203ENST00000540812 BAHCC1Q9P281 2608 aa16.83■□□□□ 0.29
TRIM65-203ENST00000540812 FAM47DPA6NHR8 397 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 GOLGA8CPA6NN73 597 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 PPP1R3GB7ZBB8 358 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 H0Y8X5 98 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 P4HA2O15460 535 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 DKK1O94907 266 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 CTSKP43235 329 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 GPD2P43304 727 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 GCNT1Q02742 428 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 CETN1Q12798 172 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 HNRNPA1L2Q32P51 320 aaKnown RBP16.83■□□□□ 0.28
TRIM65-203ENST00000540812 DCAF6Q58WW2 860 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 C9orf64Q5T6V5 341 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 KIAA0895LQ68EN5 471 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 ZNF557Q8N988 423 aaPredicted RBP16.83■□□□□ 0.28
TRIM65-203ENST00000540812 EHBP1Q8NDI1 1231 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 MDM1Q8TC05 714 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 GANCQ8TET4 914 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 FAM149B1Q96BN6 582 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 SERPINB11Q96P15 392 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 CDC6Q99741 560 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 DDX50Q9BQ39 737 aaKnown RBP16.83■□□□□ 0.28
TRIM65-203ENST00000540812 ST7Q9NRC1 585 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 FBXL12Q9NXK8 326 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.28
TRIM65-203ENST00000540812 CTNND2Q9UQB3 1225 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 TLR6Q9Y2C9 796 aa16.83■□□□□ 0.28
TRIM65-203ENST00000540812 PTPRBP23467 1997 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 TMEM131Q92545 1883 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 TTC34A8MYJ7 566 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 MID1O15344 667 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 LUC7L3O95232 432 aaKnown RBP16.82■□□□□ 0.28
TRIM65-203ENST00000540812 KRT5P13647 590 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 STX17P56962 302 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 ST8SIA6P61647 398 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 IL9RQ01113 521 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 NNTQ13423 1086 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 CDH18Q13634 790 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 SUZ12Q15022 739 aaKnown RBP16.82■□□□□ 0.28
TRIM65-203ENST00000540812 PITRM1Q5JRX3 1037 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 SYPL2Q5VXT5 272 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 TMPRSS7Q7RTY8 843 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 MMAAQ8IVH4 418 aaKnown RBP16.82■□□□□ 0.28
TRIM65-203ENST00000540812 IGSF8Q969P0 613 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 SLC6A18Q96N87 628 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 INTS2Q9H0H0 1204 aaKnown RBP16.82■□□□□ 0.28
TRIM65-203ENST00000540812 EBF2Q9HAK2 575 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 CYTH4Q9UIA0 394 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 ERVW-1Q9UQF0 538 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 NCKAP1Q9Y2A7 1128 aa16.82■□□□□ 0.28
TRIM65-203ENST00000540812 GOLGA4Q13439 2230 aaKnown RBP16.82■□□□□ 0.28
TRIM65-203ENST00000540812 A0A1W2PP55 124 aa16.81■□□□□ 0.28
TRIM65-203ENST00000540812 TYW5A2RUC4 315 aaKnown RBP16.81■□□□□ 0.28
TRIM65-203ENST00000540812 PAPSS1O43252 624 aaPredicted RBP16.81■□□□□ 0.28
TRIM65-203ENST00000540812 ASLP04424 464 aa16.81■□□□□ 0.28
TRIM65-203ENST00000540812 NUMBP49757 651 aa16.81■□□□□ 0.28
TRIM65-203ENST00000540812 CCT8P50990 548 aa16.81■□□□□ 0.28
TRIM65-203ENST00000540812 GALCP54803 685 aa16.81■□□□□ 0.28
TRIM65-203ENST00000540812 PITX1P78337 314 aaPredicted RBP16.81■□□□□ 0.28
TRIM65-203ENST00000540812 KCNH2Q12809 1159 aa16.81■□□□□ 0.28
TRIM65-203ENST00000540812 COL9A2Q14055 689 aaPredicted RBP16.81■□□□□ 0.28
TRIM65-203ENST00000540812 CST6Q15828 149 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms