RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 TMEM39BQ9GZU3 492 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 PNPLA3Q9NST1 481 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 COMMD8Q9NX08 183 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 CACNA2D2Q9NY47 1150 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 PNMA8BQ9ULN7 279 aaPredicted RBP15.3■□□□□ 0.04
GOPC-203ENST00000535237 DDTLA6NHG4 134 aaPredicted RBP15.3■□□□□ 0.04
GOPC-203ENST00000535237 MYL3P08590 195 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 EIF4BP23588 611 aaKnown RBP15.3■□□□□ 0.04
GOPC-203ENST00000535237 CCNFP41002 786 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 NUMBP49757 651 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 RTP1P59025 263 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 FASTKD3Q14CZ7 662 aaKnown RBP15.3■□□□□ 0.04
GOPC-203ENST00000535237 LRRC38Q5VT99 294 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 INTS5Q6P9B9 1019 aaKnown RBP15.3■□□□□ 0.04
GOPC-203ENST00000535237 PNPOQ9NVS9 261 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 SFMBT1Q9UHJ3 866 aa15.3■□□□□ 0.04
GOPC-203ENST00000535237 PLSCR1O15162 318 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 CHADO15335 359 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 HDAC3O15379 428 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 CD4P01730 458 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 TRIM74Q86UV6 250 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 TRIM73Q86UV7 250 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 BBS7Q8IWZ6 715 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 VPS37AQ8NEZ2 397 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 VPS33AQ96AX1 596 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 DCUN1D1Q96GG9 259 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 FICDQ9BVA6 458 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 LIMD1Q9UGP4 676 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 TSPAN16Q9UKR8 245 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 FOXN2P32314 431 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 SHMT1P34896 483 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 NAA20P61599 178 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 FRG1Q14331 258 aaKnown RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 POLD3Q15054 466 aaPredicted RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 NR6A1Q15406 480 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 ARSHQ5FYA8 562 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 SPANXN2Q5MJ10 180 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 DNAJC14Q6Y2X3 702 aaPredicted RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 ZNF572Q7Z3I7 529 aaPredicted RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 SCUBE3Q8IX30 993 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 MICALL2Q8IY33 904 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 GRHL1Q9NZI5 618 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 TRMT6Q9UJA5 497 aaKnown RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 JAK1P23458 1154 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 CLCN3P51790 818 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 PRKAA2P54646 552 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 CACHD1Q5VU97 1274 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 MPZL3Q6UWV2 235 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 SFRP1Q8N474 314 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 OR7A2PQ8NGA2 310 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 SEPT8Q92599 483 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 ZNF570Q96NI8 536 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 CLK4Q9HAZ1 481 aaKnown RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 AGO4Q9HCK5 861 aaKnown RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 ZNF70Q9UC06 446 aaPredicted RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 PRKAG2Q9UGJ0 569 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 LRFN2Q9ULH4 789 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 MAGEC1O60732 1142 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 CXCL8P10145 99 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 TCF7P36402 384 aaPredicted RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 CSE1LP55060 971 aaKnown RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 TWF1Q12792 350 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 FAM43BQ6ZT52 329 aaPredicted RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 BBS12Q6ZW61 710 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 MAP4K3Q8IVH8 894 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 SLC22A9Q8IVM8 553 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 STX19Q8N4C7 294 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 FAM120BQ96EK7 910 aaKnown RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 ZNF317Q96PQ6 595 aaPredicted RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 OSBPL11Q9BXB4 747 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 RAD21L1Q9H4I0 556 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 EURLQ9NYK6 297 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 STMN3Q9NZ72 180 aa15.29■□□□□ 0.04
GOPC-203ENST00000535237 HBS1LQ9Y450 684 aaKnown RBP15.29■□□□□ 0.04
GOPC-203ENST00000535237 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 hCG_1818297A0A087WSY0 165 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 MAGEB16A2A368 324 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 TBX10O75333 385 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 BLVRAP53004 296 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 ZNF470Q6ECI4 717 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 PRMT9Q6P2P2 845 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 PLEKHM3Q6ZWE6 761 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 LUZP2Q86TE4 346 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 SAPCD2Q86UD0 394 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 FAM126BQ8IXS8 530 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 PLEKHA8Q96JA3 519 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 FAM84AQ96KN4 292 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 VTA1Q9NP79 307 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 CDV3Q9UKY7 258 aaKnown RBP15.28■□□□□ 0.04
GOPC-203ENST00000535237 GNEQ9Y223 722 aaKnown RBP15.28■□□□□ 0.04
GOPC-203ENST00000535237 FAM20BO75063 409 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 PEX2P28328 305 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 CDH17Q12864 832 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 DDX39BQ13838 428 aaKnown RBP15.28■□□□□ 0.04
GOPC-203ENST00000535237 C15orf59Q2T9L4 293 aaPredicted RBP15.28■□□□□ 0.04
GOPC-203ENST00000535237 C6orf89Q6UWU4 347 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 OTUB1Q96FW1 271 aaPredicted RBP15.28■□□□□ 0.04
GOPC-203ENST00000535237 DEPDC7Q96QD5 511 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 PDCD2LQ9BRP1 358 aa15.28■□□□□ 0.04
GOPC-203ENST00000535237 MID1IP1Q9NPA3 183 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms