RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SERGEFQ9UGK8 458 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 STOML2Q9UJZ1 356 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 PIEZO2Q9H5I5 2752 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.84□□□□□ -0.67
COPB1-207ENST00000529866 IKBKBO14920 756 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 POLR2DO15514 142 aaKnown RBP10.84□□□□□ -0.67
COPB1-207ENST00000529866 IRAK2O43187 625 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 KLK10O43240 276 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 SIN3BO75182 1162 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 DXOO77932 396 aaKnown RBP10.84□□□□□ -0.67
COPB1-207ENST00000529866 ZBED1O96006 694 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 ADH1BP00325 375 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 HLA-DRAP01903 254 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 ASLP04424 464 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 NUDT1P36639 197 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 GABREP78334 506 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 VAC14Q08AM6 782 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 BNIP3Q12983 259 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 CUL4BQ13620 913 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 LY6DQ14210 128 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
COPB1-207ENST00000529866 SND1Q7KZF4 910 aaKnown RBP eCLIP10.84□□□□□ -0.673e-6■■■□□ 16.8
COPB1-207ENST00000529866 PIGZQ86VD9 579 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 IQCHQ86VS3 1027 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 SLC9A9Q8IVB4 645 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 MMAAQ8IVH4 418 aaKnown RBP10.84□□□□□ -0.67
COPB1-207ENST00000529866 MFN1Q8IWA4 741 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
COPB1-207ENST00000529866 TTC39CQ8N584 583 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 MFSD2AQ8NA29 543 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 KDM1BQ8NB78 822 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 OR14C36Q8NHC7 312 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 TMC2Q8TDI7 906 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 MED8Q96G25 268 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 ZNF396Q96N95 335 aaPredicted RBP10.84□□□□□ -0.67
COPB1-207ENST00000529866 C7orf25Q9BPX7 421 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 DPH1Q9BZG8 443 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 UBXN6Q9BZV1 441 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 SEMA4CQ9C0C4 833 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 EBF2Q9HAK2 575 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 SLC39A2Q9NP94 309 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 PCDHA7Q9UN72 937 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 FRMD4BQ9Y2L6 1034 aa10.84□□□□□ -0.67
COPB1-207ENST00000529866 PVALEFA0A1B0GWK0 134 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 KLRC4O43908 158 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 TBL1XO60907 577 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 MPOP05164 745 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 GOT1P17174 413 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 SLC8A1P32418 973 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 CD70P32970 193 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 PSMD8P48556 350 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 SLC11A2P49281 568 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 TKTL1P51854 596 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 ADPRHP54922 357 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 DLG4P78352 724 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 DNM1Q05193 864 aaKnown RBP10.83□□□□□ -0.68
COPB1-207ENST00000529866 ZNF211Q13398 564 aaPredicted RBP10.83□□□□□ -0.68
COPB1-207ENST00000529866 KCNJ12Q14500 433 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 RAB41Q5JT25 222 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 PRPF39Q86UA1 669 aaKnown RBP10.83□□□□□ -0.68
COPB1-207ENST00000529866 ZC3H3Q8IXZ2 948 aaKnown RBP10.83□□□□□ -0.68
COPB1-207ENST00000529866 TTC9Q92623 222 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 TTC17Q96AE7 1141 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 HEXIM2Q96MH2 286 aaKnown RBP10.83□□□□□ -0.68
COPB1-207ENST00000529866 IPO9Q96P70 1041 aaKnown RBP10.83□□□□□ -0.68
COPB1-207ENST00000529866 MTG2Q9H4K7 406 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 EVA1BQ9NVM1 165 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 PCDHB1Q9Y5F3 818 aa10.83□□□□□ -0.68
COPB1-207ENST00000529866 HEMK1Q9Y5R4 338 aaPredicted RBP10.83□□□□□ -0.68
COPB1-207ENST00000529866 TBC1D3DA0A087WVF3 549 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 TBC1D3IA0A087WXS9 549 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 TBC1D3EA0A087X179 549 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 TBC1D3KA0A087X1G2 549 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 EDDM13A0A1B0GTR0 161 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 TARSL2A2RTX5 802 aaKnown RBP10.82□□□□□ -0.68
COPB1-207ENST00000529866 TBC1D3FA6NER0 549 aaPredicted RBP10.82□□□□□ -0.68
COPB1-207ENST00000529866 TBC1D3LB9A6J9 549 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 PYCARD-AS1I3L0S3 204 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 WNT9AO14904 365 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 LATO43561 262 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 SIGLEC6O43699 453 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
COPB1-207ENST00000529866 MOCS3O95396 460 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 TBC1D3HP0C7X1 549 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 ALPPL2P10696 532 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 C5AR1P21730 350 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 CSKP41240 450 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 AFMP43652 599 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 LSSP48449 732 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 CSRP3P50461 194 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 CDH18Q13634 790 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 ARID5BQ14865 1188 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 ZNF394Q53GI3 561 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 C9orf64Q5T6V5 341 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 PIK3R6Q5UE93 754 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 RNF219Q5W0B1 726 aaPredicted RBP10.82□□□□□ -0.68
COPB1-207ENST00000529866 RESP18Q5W5W9 173 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 CEP135Q66GS9 1140 aa10.82□□□□□ -0.68
COPB1-207ENST00000529866 NUGGCQ68CJ6 796 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms