RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 DNTTP04053 509 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 CD27P26842 260 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 MATKP42679 507 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 GRIA4P48058 902 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 PLK1P53350 603 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 RPS24P62847 133 aaKnown RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 MTA1Q13330 715 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 C9orf64Q5T6V5 341 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 ZNF776Q68DI1 518 aaPredicted RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 DENND1BQ6P3S1 775 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 ZCCHC9Q8N567 271 aaKnown RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 BAHD1Q8TBE0 780 aaPredicted RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 BIRC7Q96CA5 298 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 MYEOVQ96EZ4 313 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 BTN2A3PQ96KV6 586 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 PRICKLE1Q96MT3 831 aaPredicted RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 ORAI3Q9BRQ5 295 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 MIR1-1HGQ9H1L0 117 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 CYTH4Q9UIA0 394 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 PCDHB9Q9Y5E1 797 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 ITIH6Q6UXX5 1313 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 CHD6Q8TD26 2715 aa13.1□□□□□ -0.31
TOP1MT-217ENST00000523417 KCNU1A8MYU2 1149 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 BIN1O00499 593 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 DFNA5O60443 496 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 GADD45BO75293 160 aaPredicted RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 LETM1O95202 739 aaPredicted RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 LUC7L3O95232 432 aaKnown RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 TRUB2O95900 331 aaKnown RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 SLC2A3P11169 496 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 CSKP41240 450 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 CSNK1EP49674 416 aaKnown RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 STX17P56962 302 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 ST8SIA6P61647 398 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 SUZ12Q15022 739 aaKnown RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 TEAD4Q15561 434 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 TTC31Q49AM3 519 aaPredicted RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 DCAF6Q58WW2 860 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 FSCBQ5H9T9 825 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 TRIM65Q6PJ69 517 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 CCDC117Q8IWD4 279 aaPredicted RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 CHCHD4Q8N4Q1 142 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 FAM149B1Q96BN6 582 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 FAM129BQ96TA1 746 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 CDC6Q99741 560 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 PRMT1Q99873 361 aaKnown RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 NUCKS1Q9H1E3 243 aaKnown RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 PABPC3Q9H361 631 aaKnown RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 ST7Q9NRC1 585 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 TM7SF3Q9NS93 570 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 TMEM51Q9NW97 253 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 SLC12A6Q9UHW9 1150 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 KLK13Q9UKR3 277 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 PCDHGC3Q9UN70 934 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 ERVW-1Q9UQF0 538 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 APOBEC2Q9Y235 224 aaKnown RBP13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 NCKAP1Q9Y2A7 1128 aa13.09□□□□□ -0.31
TOP1MT-217ENST00000523417 A0A1B0GVT2 93 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 BECN2A8MW95 431 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 E5RJQ4 531 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 CAPN9O14815 690 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 FLRT2O43155 660 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 PCDHGA12O60330 932 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 RNASEH1O60930 286 aaKnown RBP13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 MOCS3O95396 460 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 APOEP02649 317 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 KRT5P13647 590 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 TACR2P21452 398 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 GNA15P30679 374 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 OXCT1P55809 520 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 RACK1P63244 317 aaKnown RBP13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 ECT2LQ008S8 904 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 SULT2A1Q06520 285 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 KIF19Q2TAC6 998 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 ZC3H12AQ5D1E8 599 aaKnown RBP13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 EFHC1Q5JVL4 640 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 GBP6Q6ZN66 633 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 TAC4Q86UU9 113 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 FAM124AQ86V42 546 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 IRF2BP1Q8IU81 584 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 CARNMT1Q8N4J0 409 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 ZNF366Q8N895 744 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 SHC3Q92529 594 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 IGSF8Q969P0 613 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 FAM131CQ96AQ9 280 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 SLC2A13Q96QE2 648 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 IL21RQ9HBE5 538 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 TM9SF3Q9HD45 589 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 STIM2Q9P246 746 aa13.08□□□□□ -0.32
TOP1MT-217ENST00000523417 FZD4Q9ULV1 537 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms