RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 COL20A1Q9P218 1284 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 CDK4P11802 303 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 ENTPD1P49961 510 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 RPL14P50914 215 aaKnown RBP9.24□□□□□ -0.93
CSMD1-212ENST00000523387 EFNA5P52803 228 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 CDH15P55291 814 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 TRAF2Q12933 501 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 PRKAA1Q13131 559 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 MPP3Q13368 585 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 KCNJ11Q14654 390 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 PPM1LQ5SGD2 360 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 FBXL19Q6PCT2 694 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 KLHL35Q6PF15 583 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 MPP5Q8N3R9 675 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 SHKBP1Q8TBC3 707 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 ATP6V1E2Q96A05 226 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 APOL2Q9BQE5 337 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 BEGAINQ9BUH8 593 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 CCDC90BQ9GZT6 254 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 SNX25Q9H3E2 840 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 ZNF358Q9NW07 568 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 PLK2Q9NYY3 685 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 V9GYQ6 96 aa9.24□□□□□ -0.93
CSMD1-212ENST00000523387 ZNF839A8K0R7 811 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 MICAL2O94851 1124 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 ITGB3P05106 788 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TFAP2AP05549 437 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 ZNF252P-AS1Q0IIN9 211 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 ITGADQ13349 1161 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 SLC9B1Q4ZJI4 515 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 MTX3Q5HYI7 312 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 ZNF354CQ86Y25 554 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 CCDC60Q8IWA6 550 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 PLD5Q8N7P1 536 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TNIP2Q8NFZ5 429 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 NCSTNQ92542 709 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 CCDC97Q96F63 343 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 SDCBP2Q9H190 292 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 PXMP2Q9NR77 195 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 SNX15Q9NRS6 342 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 CCDC167Q9P0B6 97 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 SCAF8Q9UPN6 1271 aaKnown RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TELO2Q9Y4R8 837 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 STX16-NPEPL1H3BU86 382 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TRIM38O00635 465 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 CLOCKO15516 846 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 USP12O75317 370 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 H6PDO95479 791 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 IL1BP01584 269 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 AMHP03971 560 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 OATP04181 439 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 ERBB2P04626 1255 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 LCP1P13796 627 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 PGAM1P18669 254 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 ETFBP38117 255 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 CAP2P40123 477 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 ZNF143P52747 638 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 PSME3P61289 254 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TBCELQ5QJ74 424 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 POTEHQ6S545 545 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TMCO5AQ8N6Q1 288 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 VPS50Q96JG6 964 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 COQ10BQ9H8M1 238 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 POLR1BQ9H9Y6 1135 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 RUVBL2Q9Y230 463 aaKnown RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TRPC5OSA6NMA1 111 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 H2AFYO75367 372 aaKnown RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 APOA4P06727 396 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 GRIA1P42261 906 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 CDK18Q07002 472 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 GOLGA7BQ2TAP0 167 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 OGFRL1Q5TC84 451 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 MBLAC2Q68D91 279 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 FASTKD5Q7L8L6 764 aaKnown RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 ANKRD23Q86SG2 305 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 RYBPQ8N488 228 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 LRRC71Q8N4P6 559 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 BORCS5Q969J3 196 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TMEM176AQ96HP8 235 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 COX4I2Q96KJ9 171 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 GLIS2Q9BZE0 524 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 KLHL25Q9H0H3 589 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TRPC7Q9HCX4 862 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 IARS2Q9NSE4 1012 aaKnown RBP9.23□□□□□ -0.93
CSMD1-212ENST00000523387 GGA3Q9NZ52 723 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 CNTN3Q9P232 1028 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 PPME1Q9Y570 386 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 NAV1Q8NEY1 1877 aa9.23□□□□□ -0.93
CSMD1-212ENST00000523387 TRIM43BA6NCK2 446 aa9.22□□□□□ -0.93
CSMD1-212ENST00000523387 GOLGA8TH3BQL2 631 aa9.22□□□□□ -0.93
CSMD1-212ENST00000523387 BCL10O95999 233 aa9.22□□□□□ -0.93
CSMD1-212ENST00000523387 PRDX6P30041 224 aa9.22□□□□□ -0.93
CSMD1-212ENST00000523387 PTGER2P43116 358 aa9.22□□□□□ -0.93
CSMD1-212ENST00000523387 SLC25A11Q02978 314 aaKnown RBP9.22□□□□□ -0.93
CSMD1-212ENST00000523387 PABPC1LQ4VXU2 614 aaKnown RBP9.22□□□□□ -0.93
CSMD1-212ENST00000523387 GRTP1Q5TC63 336 aa9.22□□□□□ -0.93
CSMD1-212ENST00000523387 NIPA2Q8N8Q9 360 aa9.22□□□□□ -0.93
CSMD1-212ENST00000523387 SMYD1Q8NB12 490 aa9.22□□□□□ -0.93
CSMD1-212ENST00000523387 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms