RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CERCAMQ5T4B2 595 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 DCAF12L1Q5VU92 463 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 B3GNT9Q6UX72 402 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 PTCHD4Q6ZW05 846 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 APOBEC3FQ8IUX4 373 aaKnown RBP7.69□□□□□ -1.18
USP53-206ENST00000510737 DENND1CQ8IV53 801 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 ADAMTS15Q8TE58 950 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 CDX2Q99626 313 aaPredicted RBP7.69□□□□□ -1.18
USP53-206ENST00000510737 ATP6V0A4Q9HBG4 840 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 COL4A1P02462 1669 aa7.69□□□□□ -1.18
USP53-206ENST00000510737 ZSWIM8A7E2V4 1837 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 H3BML4 177 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 TFRCP02786 760 aaKnown RBP7.68□□□□□ -1.18
USP53-206ENST00000510737 PSMC4P43686 418 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 CCNIQ14094 377 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 KRTAP5-11Q6L8G4 156 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 KCTD20Q7Z5Y7 419 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 ANKRD13AQ8IZ07 590 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 MPP5Q8N3R9 675 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 MAFAQ8NHW3 353 aaPredicted RBP7.68□□□□□ -1.18
USP53-206ENST00000510737 OPTNQ96CV9 577 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 WDYHV1Q96HA8 205 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 ACO2Q99798 780 aaKnown RBP7.68□□□□□ -1.18
USP53-206ENST00000510737 FOXP1Q9H334 677 aaPredicted RBP7.68□□□□□ -1.18
USP53-206ENST00000510737 SH3TC1Q8TE82 1336 aa7.68□□□□□ -1.18
USP53-206ENST00000510737 CCL15-CCL14A0A0B4J2E2 113 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 EIF4A1P60842 406 aaKnown RBP7.67□□□□□ -1.18
USP53-206ENST00000510737 ZNF91Q05481 1191 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 SLC13A2Q13183 592 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 LARS2Q15031 903 aaKnown RBP7.67□□□□□ -1.18
USP53-206ENST00000510737 TWIST1Q15672 202 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 CCL15Q16663 113 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 TMTC4Q5T4D3 741 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 C17orf99Q6UX52 265 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 LIX1LQ8IVB5 337 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 OR6B3Q8NGW1 331 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 OR56A3Q8NH54 315 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 RAET1EQ8TD07 263 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 NSMCE1Q8WV22 266 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 CDY1Q9Y6F8 540 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 COL2A1P02458 1487 aaPredicted RBP7.67□□□□□ -1.18
USP53-206ENST00000510737 CDH23Q9H251 3354 aa7.67□□□□□ -1.18
USP53-206ENST00000510737 ALPK3Q96L96 1907 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 TMEM191BP0C7N4 346 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 SUMO2P61956 95 aaKnown RBP7.66□□□□□ -1.18
USP53-206ENST00000510737 UBXN2AP68543 259 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 CFHR1Q03591 330 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 SRSF1Q07955 248 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP53-206ENST00000510737 MEPCEQ7L2J0 689 aaKnown RBP7.66□□□□□ -1.18
USP53-206ENST00000510737 DAAM2Q86T65 1068 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 CUL5Q93034 780 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 DEFB118Q96PH6 123 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 DNMT3BQ9UBC3 853 aaKnown RBP7.66□□□□□ -1.18
USP53-206ENST00000510737 HEY2Q9UBP5 337 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 PCDHAC2Q9Y5I4 1007 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 ANKRD36CQ5JPF3 1778 aa7.66□□□□□ -1.18
USP53-206ENST00000510737 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 A0A1W2PPL8 197 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 PSMD9O00233 223 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 HOXD10P28358 340 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 PRKAR2BP31323 418 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 UQCRC1P31930 480 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 LAMB2P55268 1798 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 NANOS2P60321 138 aaKnown RBP7.65□□□□□ -1.18
USP53-206ENST00000510737 COPS6Q7L5N1 327 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 SPARTQ8N0X7 666 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 ZNF548Q8NEK5 533 aaPredicted RBP7.65□□□□□ -1.18
USP53-206ENST00000510737 ZBTB45Q96K62 511 aaPredicted RBP7.65□□□□□ -1.18
USP53-206ENST00000510737 TRIM5Q9C035 493 aa7.65□□□□□ -1.18
USP53-206ENST00000510737 MYBP10242 640 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 MMP14P50281 582 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 PRKCZQ05513 592 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 HSP90AB3PQ58FF7 597 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 TMEM65Q6PI78 240 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 IL31RAQ8NI17 732 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 GPATCH3Q96I76 525 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 CAMK1GQ96NX5 476 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 TAAR9Q96RI9 348 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 VN1R3Q9BXE9 311 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 XPNPEP3Q9NQH7 507 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 KNSTRNQ9Y448 316 aa7.64□□□□□ -1.19
USP53-206ENST00000510737 ZMYM2Q9UBW7 1377 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 CLRN2A0PK11 232 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 FAM90A10PA6NDY2 464 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 CD8B2A6NJW9 211 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 AGPSO00116 658 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 HTATSF1O43719 755 aaKnown RBP7.63□□□□□ -1.19
USP53-206ENST00000510737 SRGAP2O75044 1071 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 ALPLP05186 524 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 CBSLP0DN79 551 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 CAPN2P17655 700 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 CBSP35520 551 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 AGFG1P52594 562 aaKnown RBP7.63□□□□□ -1.19
USP53-206ENST00000510737 TIRAPP58753 221 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 AIMP1Q12904 312 aaKnown RBP7.63□□□□□ -1.19
USP53-206ENST00000510737 MIDNQ504T8 468 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 TTLL5Q6EMB2 1281 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 SWSAP1Q6NVH7 229 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 DEF8Q6ZN54 512 aa7.63□□□□□ -1.19
USP53-206ENST00000510737 MICU3Q86XE3 530 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms