RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 ACCSLQ4AC99 568 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 HES3Q5TGS1 186 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 ARHGAP17Q68EM7 881 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.57□□□□□ -1.04
SNF8-204ENST00000506104 MMS22LQ6ZRQ5 1243 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 UNC45BQ8IWX7 931 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 SCUBE3Q8IX30 993 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 ZC3H3Q8IXZ2 948 aaKnown RBP8.57□□□□□ -1.04
SNF8-204ENST00000506104 ZNF276Q8N554 614 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 HJURPQ8NCD3 748 aaPredicted RBP8.57□□□□□ -1.04
SNF8-204ENST00000506104 ADAM32Q8TC27 787 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 SLC39A7Q92504 469 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 FAM149B1Q96BN6 582 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 RPL10LQ96L21 214 aaKnown RBP8.57□□□□□ -1.04
SNF8-204ENST00000506104 TSG101Q99816 390 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 MYOCQ99972 504 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 NEUROG2Q9H2A3 272 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 TMEM245Q9H330 911 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 FBRSQ9HAH7 460 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 GDF3Q9NR23 364 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 ST7Q9NRC1 585 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 ABCC13Q9NSE7 274 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 COX16Q9P0S2 106 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 SERGEFQ9UGK8 458 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 USP25Q9UHP3 1055 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 ERVW-1Q9UQF0 538 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 TRAF3IP3Q9Y228 551 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 PCDHB4Q9Y5E5 795 aa8.57□□□□□ -1.04
SNF8-204ENST00000506104 DSPP15924 2871 aaKnown RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 A0A1B0GTQ1 180 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 A0A1W2PPC4 97 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 HAX1O00165 279 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 CAPN9O14815 690 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 VILLO15195 856 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 MAPK13O15264 365 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 PCDHGA12O60330 932 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 DFNA5O60443 496 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 ACSL4O60488 711 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 SDC3O75056 442 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 IL1BP01584 269 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 IGHV4-34P06331 123 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 VDRP11473 427 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 SLC8A1P32418 973 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 CTSOP43234 321 aaPredicted RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 ZNF445P59923 1031 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 RPS24P62847 133 aaKnown RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 RACK1P63244 317 aaKnown RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 DAB2P98082 770 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 ZBTB16Q05516 673 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 BNIP3Q12983 259 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 CUL2Q13617 745 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 PKP1Q13835 747 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 SMAD1Q15797 465 aaKnown RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 CST6Q15828 149 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 HS1BP3Q53T59 392 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 PITRM1Q5JRX3 1037 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 RAB41Q5JT25 222 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 PIK3R6Q5UE93 754 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 NUGGCQ68CJ6 796 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 TMEM270Q6UE05 265 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 KDM7AQ6ZMT4 941 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 SND1Q7KZF4 910 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNF8-204ENST00000506104 TMPRSS12Q86WS5 348 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 LGI2Q8N0V4 545 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 STK40Q8N2I9 435 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 RBBP8NLQ8NC74 664 aaPredicted RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 CLEC4CQ8WTT0 213 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 BAP1Q92560 729 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 UBL7Q96S82 380 aaPredicted RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 ELF4Q99607 663 aaPredicted RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 DDX50Q9BQ39 737 aaKnown RBP8.56□□□□□ -1.04
SNF8-204ENST00000506104 UBXN6Q9BZV1 441 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 RAI2Q9Y5P3 530 aa8.56□□□□□ -1.04
SNF8-204ENST00000506104 EDDM13A0A1B0GTR0 161 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 WNT9AO14904 365 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 APOEP02649 317 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 LTFP02788 710 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 ASLP04424 464 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 WNT1P04628 370 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 ZNF18P17022 549 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 CMA1P23946 247 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 BRD2P25440 801 aaKnown RBP8.55□□□□□ -1.04
SNF8-204ENST00000506104 GTF2H1P32780 548 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 NNMTP40261 264 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 STK19P49842 368 aaPredicted RBP8.55□□□□□ -1.04
SNF8-204ENST00000506104 NDUFA8P51970 172 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 DAOAP59103 153 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 CXADRP78310 365 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 CAMK2BQ13554 666 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 TAF1BQ53T94 588 aaPredicted RBP8.55□□□□□ -1.04
SNF8-204ENST00000506104 RAP1GAP2Q684P5 730 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 PM20D1Q6GTS8 502 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 DBX2Q6ZNG2 339 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 USP30Q70CQ3 517 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 PRPF39Q86UA1 669 aaKnown RBP8.55□□□□□ -1.04
SNF8-204ENST00000506104 CHSY1Q86X52 802 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 FAM217AQ8IXS0 508 aa8.55□□□□□ -1.04
SNF8-204ENST00000506104 OR2T34Q8NGX1 318 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms