RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 SCNM1Q9BWG6 230 aa15□□□□□ -0.01
HDLBP-247ENST00000498595 NUCKS1Q9H1E3 243 aaKnown RBP15□□□□□ -0.01
HDLBP-247ENST00000498595 SYNCQ9H7C4 482 aa15□□□□□ -0.01
HDLBP-247ENST00000498595 SGK2Q9HBY8 427 aa15□□□□□ -0.01
HDLBP-247ENST00000498595 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15□□□□□ -0.01
HDLBP-247ENST00000498595 EPG5Q9HCE0 2579 aa15□□□□□ -0.01
HDLBP-247ENST00000498595 TPRP12270 2363 aaKnown RBP14.99□□□□□ -0.01
HDLBP-247ENST00000498595 GTPBP10A4D1E9 387 aaKnown RBP14.99□□□□□ -0.01
HDLBP-247ENST00000498595 GLI1P08151 1106 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 SRPRAP08240 638 aaKnown RBP14.99□□□□□ -0.01
HDLBP-247ENST00000498595 CD59P13987 128 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 SLC9A1P19634 815 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 SPINK2P20155 84 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 TACR2P21452 398 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 KRT9P35527 623 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 ZC3H12AQ5D1E8 599 aaKnown RBP14.99□□□□□ -0.01
HDLBP-247ENST00000498595 PITRM1Q5JRX3 1037 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 RABGAP1LQ5R372 815 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 TTC39BQ5VTQ0 682 aaPredicted RBP14.99□□□□□ -0.01
HDLBP-247ENST00000498595 RAP1GAP2Q684P5 730 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 GJB7Q6PEY0 223 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 NAXDQ8IW45 347 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 KDM1BQ8NB78 822 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 SETD7Q8WTS6 366 aaKnown RBP14.99□□□□□ -0.01
HDLBP-247ENST00000498595 PPP1R13BQ96KQ4 1090 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 PPP1R9BQ96SB3 815 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 PDCL3Q9H2J4 239 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 GAREM1Q9H706 876 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 DDIT4Q9NX09 232 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 CHMP5Q9NZZ3 219 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 DACH1Q9UI36 760 aa14.99□□□□□ -0.01
HDLBP-247ENST00000498595 SYNJ2BP-COX16A0A087WUM0 186 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 EDDM13A0A1B0GTR0 161 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 TMEM8BA6NDV4 472 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 KCNU1A8MYU2 1149 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 SH3BP5O60239 455 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 HSF2BPO75031 334 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 FSBPO95073 299 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 CCR1P32246 355 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 ACSL1P33121 698 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 OXCT1P55809 520 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 ECT2LQ008S8 904 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 SLC12A1Q13621 1099 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 SUZ12Q15022 739 aaKnown RBP14.98□□□□□ -0.01
HDLBP-247ENST00000498595 TRIP6Q15654 476 aaKnown RBP14.98□□□□□ -0.01
HDLBP-247ENST00000498595 HNRNPA1L2Q32P51 320 aaKnown RBP14.98□□□□□ -0.01
HDLBP-247ENST00000498595 USP30Q70CQ3 517 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 ADAT2Q7Z6V5 191 aaKnown RBP14.98□□□□□ -0.01
HDLBP-247ENST00000498595 DHX40Q8IX18 779 aaKnown RBP14.98□□□□□ -0.01
HDLBP-247ENST00000498595 OMDQ99983 421 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 RSPH9Q9H1X1 276 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-247ENST00000498595 C6orf106Q9H6K1 298 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-247ENST00000498595 ASNSD1Q9NWL6 643 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 COX16Q9P0S2 106 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 ERVW-1Q9UQF0 538 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-247ENST00000498595 NEUROG3Q9Y4Z2 214 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 CHD8Q9HCK8 2581 aa14.98□□□□□ -0.01
HDLBP-247ENST00000498595 TARSL2A2RTX5 802 aaKnown RBP14.97□□□□□ -0.01
HDLBP-247ENST00000498595 C1QTNF9BB2RNN3 333 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 PES1O00541 588 aaKnown RBP14.97□□□□□ -0.01
HDLBP-247ENST00000498595 HYAL3O43820 417 aaPredicted RBP14.97□□□□□ -0.01
HDLBP-247ENST00000498595 SIN3BO75182 1162 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 GJB3O75712 270 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 C1QTNF9P0C862 333 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 ZNF883P0CG24 379 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 PRKCSHP14314 528 aaPredicted RBP14.97□□□□□ -0.01
HDLBP-247ENST00000498595 CD27P26842 260 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 PON1P27169 355 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 BPIFB4P59827 614 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 SULT2A1Q06520 285 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 MAN2A1Q16706 1144 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 HLA-BQ31612 363 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 OR6B2Q6IFH4 312 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 C11orf57Q6ZUT1 292 aaPredicted RBP14.97□□□□□ -0.01
HDLBP-247ENST00000498595 PASD1Q8IV76 773 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 SHC3Q92529 594 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 SKA1Q96BD8 255 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 PABPC3Q9H361 631 aaKnown RBP14.97□□□□□ -0.01
HDLBP-247ENST00000498595 ACP6Q9NPH0 428 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 FBXL12Q9NXK8 326 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 CYTH4Q9UIA0 394 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 PCDHGC3Q9UN70 934 aa14.97□□□□□ -0.01
HDLBP-247ENST00000498595 APOBEC2Q9Y235 224 aaKnown RBP14.97□□□□□ -0.01
HDLBP-247ENST00000498595 A0A1B0GVT2 93 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 FAM47DPA6NHR8 397 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 LRRC72A6NJI9 287 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 BECN2A8MW95 431 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 TOP3BO95985 862 aaKnown RBP14.96□□□□□ -0.01
HDLBP-247ENST00000498595 C7P10643 843 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 CSNK1EP49674 416 aaKnown RBP14.96□□□□□ -0.01
HDLBP-247ENST00000498595 ARID5BQ14865 1188 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 CST6Q15828 149 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 FSCBQ5H9T9 825 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 MMS22LQ6ZRQ5 1243 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 SND1Q7KZF4 910 aaKnown RBP eCLIP14.96□□□□□ -0.01
HDLBP-247ENST00000498595 DEFB106AQ8N104 65 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 BIRC7Q96CA5 298 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 LMLNQ96KR4 655 aa14.96□□□□□ -0.01
HDLBP-247ENST00000498595 CAMK1GQ96NX5 476 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms