RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 GALNT11Q8NCW6 608 aa5□□□□□ -1.61
XPA-204ENST00000496104 ZNF461Q8TAF7 563 aa5□□□□□ -1.61
XPA-204ENST00000496104 SPATA20Q8TB22 786 aa5□□□□□ -1.61
XPA-204ENST00000496104 DEPTORQ8TB45 409 aa5□□□□□ -1.61
XPA-204ENST00000496104 ZNF564Q8TBZ8 553 aaPredicted RBP5□□□□□ -1.61
XPA-204ENST00000496104 SSC4DQ8WTU2 575 aa5□□□□□ -1.61
XPA-204ENST00000496104 COG1Q8WTW3 980 aa5□□□□□ -1.61
XPA-204ENST00000496104 BTN2A2Q8WVV5 523 aa5□□□□□ -1.61
XPA-204ENST00000496104 DNASE2BQ8WZ79 361 aa5□□□□□ -1.61
XPA-204ENST00000496104 CD101Q93033 1021 aa5□□□□□ -1.61
XPA-204ENST00000496104 PRR11Q96HE9 360 aaPredicted RBP5□□□□□ -1.61
XPA-204ENST00000496104 TBC1D32Q96NH3 1257 aa5□□□□□ -1.61
XPA-204ENST00000496104 MAP7D2Q96T17 732 aa5□□□□□ -1.61
XPA-204ENST00000496104 FUCA2Q9BTY2 467 aa5□□□□□ -1.61
XPA-204ENST00000496104 DPH1Q9BZG8 443 aa5□□□□□ -1.61
XPA-204ENST00000496104 ZDHHC5Q9C0B5 715 aa5□□□□□ -1.61
XPA-204ENST00000496104 RIOX1Q9H6W3 641 aa5□□□□□ -1.61
XPA-204ENST00000496104 GPRC5CQ9NQ84 441 aa5□□□□□ -1.61
XPA-204ENST00000496104 ZNF302Q9NR11 478 aa5□□□□□ -1.61
XPA-204ENST00000496104 SUCOQ9UBS9 1254 aaKnown RBP5□□□□□ -1.61
XPA-204ENST00000496104 TJP2Q9UDY2 1190 aa5□□□□□ -1.61
XPA-204ENST00000496104 HIF3AQ9Y2N7 669 aa5□□□□□ -1.61
XPA-204ENST00000496104 TMEM98Q9Y2Y6 226 aa5□□□□□ -1.61
XPA-204ENST00000496104 SHANK1Q9Y566 2161 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 PHLPP2Q6ZVD8 1323 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 A0A1B0GVT2 93 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 A0A1W2PQF6 199 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 TCRBV21S2A2A0A5A6 115 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 VPS37CA5D8V6 355 aaPredicted RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 DDX39AO00148 427 aaKnown RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 KCNK3O14649 394 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 RGS13O14921 159 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 N4BP3O15049 544 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 PAPSS1O43252 624 aaPredicted RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 PCDHGA12O60330 932 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 TADA2AO75478 443 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 UBOX5O94941 541 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 ZBED1O96006 694 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 HRGP04196 525 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 SLC3A2P08195 630 aaKnown RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 JMJD7P0C870 316 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 SCP2P22307 547 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 SFPQP23246 707 aaKnown RBP eCLIP4.99□□□□□ -1.61
XPA-204ENST00000496104 AKAP5P24588 427 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 CDC25BP30305 580 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 CTNNA1P35221 906 aaKnown RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 PEX19P40855 299 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 TSPAN7P41732 249 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 MATKP42679 507 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 AFMP43652 599 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 USP11P51784 963 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 PMS1P54277 932 aaKnown RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 GABREP78334 506 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 KRT83P78385 493 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 CYP4F8P98187 520 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 IL9RQ01113 521 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 WASHC5Q12768 1159 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 GRIK3Q13003 919 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 KLF1Q13351 362 aaPredicted RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 TRIM14Q14142 442 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 PSMD6Q15008 389 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 KIF19Q2TAC6 998 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 SV2CQ496J9 727 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 CYP4A22Q5TCH4 519 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 ARMC3Q5W041 872 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 CAPRIN2Q6IMN6 1127 aaKnown RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 SWSAP1Q6NVH7 229 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 TMEM150AQ86TG1 271 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 TTC9BQ8N6N2 239 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 OTUD7AQ8TE49 926 aaPredicted RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 USP13Q92995 863 aaPredicted RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 CCDC47Q96A33 483 aaKnown RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 SGCZQ96LD1 299 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 LRGUKQ96M69 825 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 YTHDC1Q96MU7 727 aaKnown RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 ACAP3Q96P50 834 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 ORAI3Q9BRQ5 295 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 NAA15Q9BXJ9 866 aaKnown RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 GCOM2Q9BZD3 368 aaPredicted RBP4.99□□□□□ -1.61
XPA-204ENST00000496104 RNF38Q9H0F5 515 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 SLC25A18Q9H1K4 315 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 TSPY26PQ9H489 355 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 SLITRK6Q9H5Y7 841 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 TRIM39Q9HCM9 518 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 ASAH2Q9NR71 780 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 STOML1Q9UBI4 398 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 YIPF1Q9Y548 306 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 KIF26BQ2KJY2 2108 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 RTTNQ86VV8 2226 aa4.99□□□□□ -1.61
XPA-204ENST00000496104 LOC100289279A0A1B0GTE1 492 aa4.98□□□□□ -1.61
XPA-204ENST00000496104 A0A1B0GTW7 788 aa4.98□□□□□ -1.61
XPA-204ENST00000496104 GTPBP10A4D1E9 387 aaKnown RBP4.98□□□□□ -1.61
XPA-204ENST00000496104 PRR19A6NJB7 356 aa4.98□□□□□ -1.61
XPA-204ENST00000496104 KLRF2D3W0D1 207 aa4.98□□□□□ -1.61
XPA-204ENST00000496104 H0Y8X5 98 aa4.98□□□□□ -1.61
XPA-204ENST00000496104 MAGEB2O15479 319 aa4.98□□□□□ -1.61
XPA-204ENST00000496104 MTSS1O43312 755 aa4.98□□□□□ -1.61
XPA-204ENST00000496104 EIF4EBP3O60516 100 aaPredicted RBP4.98□□□□□ -1.61
XPA-204ENST00000496104 ADAM11O75078 769 aa4.98□□□□□ -1.61
XPA-204ENST00000496104 PPFIA2O75334 1257 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms